RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 ATPAF2Q8N5M1 289 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 LZTR1Q8N653 840 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 ATL2Q8NHH9 583 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 SCG3Q8WXD2 468 aaKnown RBP16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 TSACCQ96A04 125 aaPredicted RBP16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 NAF1Q96HR8 494 aaKnown RBP16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 LRRC61Q9BV99 259 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 NUP85Q9BW27 656 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 THAP2Q9H0W7 228 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 SUDS3Q9H7L9 328 aaPredicted RBP16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 SCUBE2Q9NQ36 999 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 GOLGA6AQ9NYA3 693 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 BZW2Q9Y6E2 419 aaKnown RBP16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 CSNK1G3Q9Y6M4 447 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 KNL1Q8NG31 2342 aa16.26■□□□□ 0.19
IGHV3-42-201ENST00000520410 TTC24A2A3L6 582 aaPredicted RBP16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 RIOK3O14730 519 aaKnown RBP16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 RASGRP1O95267 797 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 SERPING1P05155 500 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 MPOP05164 745 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 TSHRP16473 764 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 MMP12P39900 470 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 GABREP78334 506 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 ITKQ08881 620 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 CCDC173Q0VFZ6 552 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 PIGHQ14442 188 aaPredicted RBP16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 INPP5AQ14642 412 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 RFTN1Q14699 578 aaPredicted RBP16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 WSCD2Q2TBF2 565 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 CCDC122Q5T0U0 273 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 PSTKQ8IV42 348 aaKnown RBP16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 TP53INP2Q8IXH6 220 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 DCBLD1Q8N8Z6 715 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 FAM181AQ8N9Y4 354 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 HCAR2Q8TDS4 363 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 RFFLQ8WZ73 363 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 CRELD1Q96HD1 420 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 LGMNQ99538 433 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 APOOQ9BUR5 198 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 IFNKQ9P0W0 207 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 IP6K2Q9UHH9 426 aa16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 LUC7L2Q9Y383 392 aaKnown RBP16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 TDRD6O60522 2096 aaKnown RBP16.25■□□□□ 0.19
IGHV3-42-201ENST00000520410 CHD5Q8TDI0 1954 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 TSPAN11A1L157 253 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 TMEM110-MUSTN1A8MSY1 372 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 CACNB4O00305 520 aaPredicted RBP16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 TOR1BO14657 336 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 TLX3O43711 291 aaPredicted RBP16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 GCATO75600 419 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 CPP00450 1065 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 TPM3P06753 285 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 GP1BAP07359 652 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 ALPIP09923 528 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 HOXB3P14651 431 aaPredicted RBP16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 TCF4P15884 667 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 IL1R2P27930 398 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 SERPINB6P35237 376 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 PCK1P35558 622 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 AP1S1P61966 158 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 POLR2LP62875 67 aaKnown RBP16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 SLC10A7Q0GE19 358 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 DPYSQ14117 519 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 NFATC4Q14934 902 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 ELOCQ15369 112 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 BOLA3Q53S33 107 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 FIGNQ5HY92 759 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 C3orf38Q5JPI3 329 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 C6orf132Q5T0Z8 1188 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 ZSWIM9Q86XI8 627 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 VOPP1Q96AW1 172 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 WDR92Q96MX6 357 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 FUCA2Q9BTY2 467 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 ISCUQ9H1K1 167 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 SALL4Q9UJQ4 1053 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 TTLL3Q9Y4R7 772 aa16.24■□□□□ 0.19
IGHV3-42-201ENST00000520410 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 A0A1W2PQJ5 194 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 TPP1O14773 563 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 RECQL5O94762 991 aaPredicted RBP16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 TNFP01375 233 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 CELA2BP08218 269 aaPredicted RBP16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 RARAP10276 462 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 TGM2P21980 687 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 NFKBIAP25963 317 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 ITPKBP27987 946 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 CSNK1DP48730 415 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 HCAR3P49019 387 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 CDH6P55285 790 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 SRP54P61011 504 aaKnown RBP16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 MAXP61244 160 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 ZBED6P86452 979 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 RTP5Q14D33 572 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 ACAP1Q15027 740 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 DPYSL2Q16555 572 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 HADHQ16836 314 aaKnown RBP16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 ALG11Q2TAA5 492 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 CYP4V2Q6ZWL3 525 aaPredicted RBP16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 GKN2Q86XP6 184 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms