RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 KCNJ11Q14654 390 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 CASP8Q14790 479 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 MORF4L2Q15014 288 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 UAP1Q16222 522 aaPredicted RBP8□□□□□ -1.13
CTHRC1-203ENST00000520337 HSP90B2PQ58FF3 399 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 SLC6A19Q695T7 634 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 HEATR6Q6AI08 1181 aaKnown RBP8□□□□□ -1.13
CTHRC1-203ENST00000520337 TMC5Q6UXY8 1006 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 C4orf22Q6V702 233 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 CHST9Q7L1S5 443 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 TMC3Q7Z5M5 1100 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 LRRC49Q8IUZ0 686 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 CCDC13Q8IYE1 715 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 CMTM8Q8IZV2 173 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 ZNF567Q8N184 647 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 ZCCHC9Q8N567 271 aaKnown RBP8□□□□□ -1.13
CTHRC1-203ENST00000520337 TAB3Q8N5C8 712 aaPredicted RBP8□□□□□ -1.13
CTHRC1-203ENST00000520337 OR52K2Q8NGK3 314 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 ITFG1Q8TB96 612 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 SMG7Q92540 1137 aaKnown RBP8□□□□□ -1.13
CTHRC1-203ENST00000520337 USP13Q92995 863 aaPredicted RBP8□□□□□ -1.13
CTHRC1-203ENST00000520337 FATE1Q969F0 183 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 HMCESQ96FZ2 354 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 ZNF419Q96HQ0 510 aaPredicted RBP8□□□□□ -1.13
CTHRC1-203ENST00000520337 HSPA12BQ96MM6 686 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 SPATA13Q96N96 652 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 RPRD1AQ96P16 312 aaPredicted RBP8□□□□□ -1.13
CTHRC1-203ENST00000520337 FMO2Q99518 471 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 DDX50Q9BQ39 737 aaKnown RBP8□□□□□ -1.13
CTHRC1-203ENST00000520337 EPB41L4BQ9H329 900 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 SFXN1Q9H9B4 322 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 SEMA3GQ9NS98 782 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 DONSONQ9NYP3 566 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 CCL26Q9Y258 94 aa8□□□□□ -1.13
CTHRC1-203ENST00000520337 REV3LO60673 3130 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 E2F8A0AVK6 867 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ERICH4A6NGS2 130 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 A6NNZ2 444 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 PRR33A8MZF0 331 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 RASA4BC9J798 803 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ZNF197O14709 1029 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 CHADO15335 359 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 LINC01565O15544 149 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 MTSS1O43312 755 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 RASA4O43374 803 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 CACNG3O60359 315 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 TSPAN3O60637 253 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 OPHN1O60890 802 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 CLDN11O75508 207 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ZNF189O75820 626 aaPredicted RBP7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 TMEM63AO94886 807 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 PRAMEF12O95522 483 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 RECKO95980 971 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 PGRP06401 933 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 OR1E1P30953 314 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ACVRL1P37023 503 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 CDH4P55283 916 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 YBEYP58557 167 aaPredicted RBP7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 IFI35P80217 286 aaPredicted RBP7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 SEMA5AQ13591 1074 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 CBX2Q14781 532 aaPredicted RBP7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ZSCAN26Q16670 478 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 PARP6Q2NL67 630 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 TUBB8Q3ZCM7 444 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 PARP15Q460N3 678 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 TEX44Q53QW1 395 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ARHGAP15Q53QZ3 475 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 TCEAL5Q5H9L2 206 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 RABGAP1LQ5R372 815 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 FAXCQ5TGI0 409 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 SYCE2Q6PIF2 218 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 LEKR1Q6ZMV7 388 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 PCGF5Q86SE9 256 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 GPR149Q86SP6 731 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 HOOK3Q86VS8 718 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ZSWIM9Q86XI8 627 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 RELL1Q8IUW5 271 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 BBS7Q8IWZ6 715 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 PPIL6Q8IXY8 311 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 IQCKQ8N0W5 287 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 CPXM2Q8N436 756 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ATPAF2Q8N5M1 289 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 EFHBQ8N7U6 833 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 CNTD1Q8N815 330 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 SH3RF2Q8TEC5 729 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ING5Q8WYH8 240 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 MAML1Q92585 1016 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 LRRC3BQ96PB8 259 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 IL12RB2Q99665 862 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 GORASP1Q9BQQ3 440 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 FOXP3Q9BZS1 431 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 NSUN3Q9H649 340 aaKnown RBP7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 PRDM7Q9NQW5 492 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 TDP1Q9NUW8 608 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 IGSF9Q9P2J2 1179 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 MTRF1LQ9UGC7 380 aaKnown RBP7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 IPO11Q9UI26 975 aaKnown RBP7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ZMYM5Q9UJ78 669 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 ADAM30Q9UKF2 790 aa7.99□□□□□ -1.13
CTHRC1-203ENST00000520337 HPCAL4Q9UM19 191 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms