RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 PTPRCAPQ14761 206 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 FAM83EQ2M2I3 478 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 MYLK4Q86YV6 388 aaPredicted RBP25.88■■□□□ 1.73
COL13A1-213ENST00000520267 OR7D4Q8NG98 312 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 SCLYQ96I15 445 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 LENG8Q96PV6 779 aaPredicted RBP25.88■■□□□ 1.73
COL13A1-213ENST00000520267 MRPL9Q9BYD2 267 aaKnown RBP25.88■■□□□ 1.73
COL13A1-213ENST00000520267 SUDS3Q9H7L9 328 aaPredicted RBP25.88■■□□□ 1.73
COL13A1-213ENST00000520267 CYP4F11Q9HBI6 524 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 GPAMQ9HCL2 828 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 NMRK1Q9NWW6 199 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 VTI1BQ9UEU0 232 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 G3BP2Q9UN86 482 aaKnown RBP25.88■■□□□ 1.73
COL13A1-213ENST00000520267 KIF3CO14782 793 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 NPHS1O60500 1241 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 GJB5O95377 273 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 CCDC166P0CW27 439 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 ATP5C1P36542 298 aaKnown RBP25.88■■□□□ 1.73
COL13A1-213ENST00000520267 SERPINB5P36952 375 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 NSUN2Q08J23 767 aaKnown RBP eCLIP25.88■■□□□ 1.73
COL13A1-213ENST00000520267 GALNT3Q14435 633 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 SLC14A2Q15849 920 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 C5orf22Q49AR2 442 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 LRRC74BQ6ZQY2 392 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 TRIM67Q6ZTA4 783 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 GALNT7Q86SF2 657 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 SLAIN1Q8ND83 568 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 BLOC1S5Q8TDH9 187 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 ANKRD49Q8WVL7 239 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 TBATAQ96M53 351 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 DNMT3LQ9UJW3 386 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 SSX2IPQ9Y2D8 614 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 ARL5AQ9Y689 179 aa25.88■■□□□ 1.73
COL13A1-213ENST00000520267 HOXA2O43364 376 aa25.87■■□□□ 1.73
COL13A1-213ENST00000520267 SORBS2O94875 1100 aaKnown RBP25.87■■□□□ 1.73
COL13A1-213ENST00000520267 LTA4HP09960 611 aaKnown RBP25.87■■□□□ 1.73
COL13A1-213ENST00000520267 KCNA5P22460 613 aa25.87■■□□□ 1.73
COL13A1-213ENST00000520267 CDKN2DP55273 166 aa25.87■■□□□ 1.73
COL13A1-213ENST00000520267 DNAJB13P59910 316 aa25.87■■□□□ 1.73
COL13A1-213ENST00000520267 REM2Q8IYK8 340 aaPredicted RBP25.87■■□□□ 1.73
COL13A1-213ENST00000520267 KDM1BQ8NB78 822 aa25.87■■□□□ 1.73
COL13A1-213ENST00000520267 ACTRT2Q8TDY3 377 aa25.87■■□□□ 1.73
COL13A1-213ENST00000520267 FEM1CQ96JP0 617 aa25.87■■□□□ 1.73
COL13A1-213ENST00000520267 VWA7Q9Y334 891 aa25.87■■□□□ 1.73
COL13A1-213ENST00000520267 ZFP37Q9Y6Q3 630 aaPredicted RBP25.87■■□□□ 1.73
COL13A1-213ENST00000520267 TMEM233B4DJY2 109 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 SLCO1B7G3V0H7 640 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 HOXD9P28356 352 aaPredicted RBP25.86■■□□□ 1.73
COL13A1-213ENST00000520267 PFKPQ01813 784 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 AGAP9Q5VTM2 703 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 SH3RF2Q8TEC5 729 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 DNAJC9Q8WXX5 260 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 TSPAN17Q96FV3 270 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 ZNF333Q96JL9 665 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 CYP4F12Q9HCS2 524 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 NCKIPSDQ9NZQ3 722 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 MTF2Q9Y483 593 aaPredicted RBP25.86■■□□□ 1.73
COL13A1-213ENST00000520267 NVLO15381 856 aaKnown RBP25.86■■□□□ 1.73
COL13A1-213ENST00000520267 PIRTP0C851 137 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 PIK3R1P27986 724 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 EPHB1P54762 984 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 GNA12Q03113 381 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 PDCD2Q16342 344 aaPredicted RBP25.86■■□□□ 1.73
COL13A1-213ENST00000520267 PGM2L1Q6PCE3 622 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 TMEM207Q6UWW9 146 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 ACAD11Q709F0 780 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 DEFB107AQ8IZN7 70 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 DNAJC1Q96KC8 554 aaKnown RBP25.86■■□□□ 1.73
COL13A1-213ENST00000520267 UBXN10Q96LJ8 280 aa25.86■■□□□ 1.73
COL13A1-213ENST00000520267 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.86■■□□□ 1.73
COL13A1-213ENST00000520267 PDE5AO76074 875 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 HLA-DPA1P20036 260 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 OR1D2P34982 312 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 MUM1Q2TAK8 710 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 KIRREL3Q8IZU9 778 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 MAB21L3Q8N8X9 362 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 ZNF512Q96ME7 567 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-213ENST00000520267 NACA2Q9H009 215 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 GPBP1L1Q9HC44 474 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-213ENST00000520267 ARHGAP26Q9UNA1 814 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 CDYLQ9Y232 598 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 PITPNM1O00562 1244 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 CCNT2O60583 730 aaKnown RBP25.85■■□□□ 1.73
COL13A1-213ENST00000520267 GOT2P00505 430 aaKnown RBP25.85■■□□□ 1.73
COL13A1-213ENST00000520267 FGF1P05230 155 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 HNRNPLP14866 589 aaKnown RBP eCLIP25.85■■□□□ 1.73
COL13A1-213ENST00000520267 RPS24P62847 133 aaKnown RBP25.85■■□□□ 1.73
COL13A1-213ENST00000520267 ACVR1Q04771 509 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 BTKQ06187 659 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 MTA1Q13330 715 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 TMEM198Q66K66 360 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 TRIM68Q6AZZ1 485 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 IL31Q6EBC2 164 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 SLC8B1Q6J4K2 584 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 PIWIL4Q7Z3Z4 852 aaKnown RBP25.85■■□□□ 1.73
COL13A1-213ENST00000520267 CNDP1Q96KN2 507 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 ZNF599Q96NL3 588 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 RTKNQ9BST9 563 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 CDH22Q9UJ99 828 aa25.85■■□□□ 1.73
COL13A1-213ENST00000520267 CRYL1Q9Y2S2 319 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms