RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ELLP55199 621 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 RRP1P56182 461 aaKnown RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 PSMC6P62333 389 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 SLC10A2Q12908 348 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 FOXF2Q12947 444 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 TMEM266Q2M3C6 531 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 C15orf59Q2T9L4 293 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 TMEM119Q4V9L6 283 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 BMP2KLQ5H9B9 411 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 PAPD7Q5XG87 772 aaKnown RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 PMS2CLQ68D20 193 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 LRRC8EQ6NSJ5 796 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 LCTLQ6UWM7 567 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 DEF8Q6ZN54 512 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 SEPT14Q6ZU15 432 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 DNAAF5Q86Y56 855 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 Q8N1X5 172 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 LRRC57Q8N9N7 239 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 FAM98AQ8NCA5 519 aaKnown RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 IGFBPL1Q8WX77 278 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 CNDP2Q96KP4 475 aaKnown RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZMAT2Q96NC0 199 aaKnown RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 OR2A14Q96R47 310 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 KRTAP4-12Q9BQ66 201 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 SCNM1Q9BWG6 230 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 MVB12BQ9H7P6 319 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 MAGEE1Q9HCI5 957 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 SH3GLB2Q9NR46 395 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 TMEM45AQ9NWC5 275 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 PLEKHB1Q9UF11 243 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 NENFQ9UMX5 172 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 HS3ST3A1Q9Y663 406 aa5.49□□□□□ -1.53
HMGB1P46-201ENST00000520062 OR2A25A4D2G3 310 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 UBE2CO00762 179 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 DAB1O75553 588 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 PRKCGP05129 697 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 APOA4P06727 396 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 ETFAP13804 333 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 PON1P27169 355 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 CHATP28329 748 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 TNFSF8P32971 234 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 CXCR3P49682 368 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 GHRHRQ02643 423 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 DPTQ07507 201 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 ACSM2AQ08AH3 577 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 FAM27E3Q08E93 113 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 IKQ13123 557 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 PRPF4BQ13523 1007 aaKnown RBP5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 ESCO2Q56NI9 601 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 PIK3CD-AS1Q5SR53 167 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 KIAA1614Q5VZ46 1190 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 ARMC3Q5W041 872 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 ACSM2BQ68CK6 577 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 PLEKHA7Q6IQ23 1121 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 MIS18BP1Q6P0N0 1132 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 CFAP77Q6ZQR2 320 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 LINGO2Q7L985 606 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 RBFAQ8N0V3 343 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 IL17RCQ8NAC3 791 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 POMGNT2Q8NAT1 580 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 KDM1BQ8NB78 822 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 AVL9Q8NBF6 648 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 KCTD6Q8NC69 237 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 BEST2Q8NFU1 509 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 GPR150Q8NGU9 434 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 BICD2Q8TD16 824 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 FAM110AQ9BQ89 295 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 TMEM47Q9BQJ4 181 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 C1QTNF5Q9BXJ0 243 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 TKTL2Q9H0I9 626 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 RABEP2Q9H5N1 569 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 THSD1Q9NS62 852 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 KLHL13Q9P2N7 655 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 NOL7Q9UMY1 257 aaKnown RBP5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 MAU2Q9Y6X3 613 aa5.48□□□□□ -1.53
HMGB1P46-201ENST00000520062 LOC100509620A0A075B734 347 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 LRRC3CA6NJW4 275 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 A8MV72 311 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 ATP2C2O75185 946 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 MTA2O94776 668 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 MMP2P08253 660 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 CTSAP10619 480 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 CERS1P27544 350 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 DCTDP32321 178 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 CLCN5P51795 746 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 GALCP54803 685 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 KRTAP10-2P60368 255 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 ROR1Q01973 937 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 AIMP1Q12904 312 aaKnown RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 KLF10Q13118 480 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 TNFAIP1Q13829 316 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 BAATQ14032 418 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 NAB2Q15742 525 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 KYNUQ16719 465 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 ZXDCQ2QGD7 858 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 ALDH1L2Q3SY69 923 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 QSOX2Q6ZRP7 698 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 TRILQ7L0X0 811 aa5.47□□□□□ -1.53
HMGB1P46-201ENST00000520062 LINC00346Q8IVM7 164 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms