RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 KPNB1Q14974 876 aaKnown RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 HERC3Q15034 1050 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 TAF11Q15544 211 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 GSTA3Q16772 222 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 TSNAXIP1Q2TAA8 658 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ARL13BQ3SXY8 428 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ANKRD20A4Q4UJ75 823 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 DCAF6Q58WW2 860 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 BRMS1LQ5PSV4 323 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ACBD5Q5T8D3 534 aaPredicted RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 SYPL2Q5VXT5 272 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 AFMIDQ63HM1 303 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 WSCD1Q658N2 575 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 IRGCQ6NXR0 463 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 EPGNQ6UW88 154 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ATG14Q6ZNE5 492 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 CCDC80Q76M96 950 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 MAVSQ7Z434 540 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 GALNT7Q86SF2 657 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 LINC00523Q86TU6 105 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 PDZD3Q86UT5 571 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 RASSF3Q86WH2 238 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 LRRC49Q8IUZ0 686 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 SCUBE1Q8IWY4 988 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 SIX6OS1Q8N1H7 587 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 LZTR1Q8N653 840 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 RBM15BQ8NDT2 890 aaKnown RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 FAM81AQ8TBF8 368 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 GPBAR1Q8TDU6 330 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ACTRT2Q8TDY3 377 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 JADE3Q92613 823 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 PGBD4Q96DM1 585 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 SMARCD1Q96GM5 515 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 CNDP1Q96KN2 507 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 TEKT5Q96M29 485 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 FCRL3Q96P31 734 aaPredicted RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 FCRL5Q96RD9 977 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 HAPLN3Q96S86 360 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 IL12RB2Q99665 862 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 GPR22Q99680 433 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 PTPN18Q99952 460 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 RTP3Q9BQQ7 232 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ACBD6Q9BR61 282 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 CCDC28BQ9BUN5 200 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 MLPHQ9BV36 600 aaPredicted RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 COLEC11Q9BWP8 271 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 C1QTNF1Q9BXJ1 281 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ULBP1Q9BZM6 244 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 SLC13A1Q9BZW2 595 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 SENP6Q9GZR1 1112 aaPredicted RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 ANLNQ9NQW6 1124 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 SNX15Q9NRS6 342 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.12□□□□□ -1.591e-10■■■■□ 26
SDC2-204ENST00000519914 OSER1Q9NX31 292 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ZDHHC7Q9NXF8 308 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 BFARQ9NZS9 450 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 PPARGC1AQ9UBK2 798 aaKnown RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 SUN2Q9UH99 717 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 VPS28Q9UK41 221 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 ANGPTL2Q9UKU9 493 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 DSEQ9UL01 958 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 VANGL2Q9ULK5 521 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 APOBEC2Q9Y235 224 aaKnown RBP5.12□□□□□ -1.59
SDC2-204ENST00000519914 SSX2IPQ9Y2D8 614 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 LRCH1Q9Y2L9 728 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 PSAT1Q9Y617 370 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 CDY2AQ9Y6F7 541 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 CDY1Q9Y6F8 540 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 MIA3Q5JRA6 1907 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 MYO16Q9Y6X6 1858 aa5.12□□□□□ -1.59
SDC2-204ENST00000519914 GREB1Q4ZG55 1949 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 A0A088AWK7 358 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 ARHGEF37A1IGU5 675 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 YJEFN3A6XGL0 299 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 PRR5-ARHGAP8B1AHC4 643 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 B2RBV5 119 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 TARM1B6A8C7 271 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 FAM72CH0Y354 149 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 CLDN5O00501 218 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 HGSO14964 777 aaPredicted RBP5.11□□□□□ -1.59
SDC2-204ENST00000519914 NVLO15381 856 aaKnown RBP5.11□□□□□ -1.59
SDC2-204ENST00000519914 FGF10O15520 208 aaPredicted RBP5.11□□□□□ -1.59
SDC2-204ENST00000519914 ITM2AO43736 263 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 DUSP11O75319 330 aaKnown RBP5.11□□□□□ -1.59
SDC2-204ENST00000519914 TBX10O75333 385 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 E2F6O75461 281 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 CABYRO75952 493 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 KRT36O76013 467 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 THP07101 528 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 RALBP11234 206 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 TYMPP19971 482 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 GLDCP23378 1020 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 ACAT1P24752 427 aaKnown RBP5.11□□□□□ -1.59
SDC2-204ENST00000519914 ARNTP27540 789 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 CRABP2P29373 138 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 ARRB2P32121 409 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 ADRA1AP35348 466 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 NDUFV1P49821 464 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 RAB27AP51159 221 aa5.11□□□□□ -1.59
SDC2-204ENST00000519914 SESN2P58004 480 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms