RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	HERC2P3	Q9BVR0	1158 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	RNPEPL1	Q9HAU8	725 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	MARCH4	Q9P2E8	410 aa	Predicted RBP	12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	UBA2	Q9UBT2	640 aa	Predicted RBP	12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	STOML2	Q9UJZ1	356 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	PLA2G4C	Q9UP65	541 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	ARL5A	Q9Y689	179 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	LTBP2	Q14767	1821 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362		A0A1B0GVM2	712 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	C2orf78	A6NCI8	922 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	TCAF2	A6NFQ2	919 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	OR51F1	A6NGY5	319 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	NDST3	O95803	873 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	MPST	P25325	297 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	RGR	P47804	291 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	RPL14	P50914	215 aa	Known RBP	12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	RAP1GDS1	P52306	607 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	DNAJB13	P59910	316 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	KDSR	Q06136	332 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	ILF2	Q12905	390 aa	Known RBP	12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	PRKAA1	Q13131	559 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	PLD1	Q13393	1074 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	GALNT3	Q14435	633 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	SLC9B1	Q4ZJI4	515 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	ARL13A	Q5H913	290 aa	Predicted RBP	12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	METTL21C	Q5VZV1	264 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	TMC7	Q7Z402	723 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	TMEM150A	Q86TG1	271 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	ENDOV	Q8N8Q3	282 aa	Known RBP	12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	PNPLA1	Q8N8W4	532 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	GPR150	Q8NGU9	434 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	PDCD6IP	Q8WUM4	868 aa	Known RBP	12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	STON2	Q8WXE9	905 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	MCUR1	Q96AQ8	359 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	TSPAN17	Q96FV3	270 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	TMEM169	Q96HH4	297 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	TBATA	Q96M53	351 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	ZNF558	Q96NG5	402 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	SPON2	Q9BUD6	331 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	CINP	Q9BW66	212 aa	Predicted RBP	12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	CRISPLD2	Q9H0B8	497 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	VWA7	Q9Y334	891 aa		12.44	□□□□□ -0.42
SPIDR-210	ENST00000519362	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	NPHS1	O60500	1241 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	ENTPD5	O75356	428 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	PIGN	O95427	931 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	RHOC	P08134	193 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	HSPA1A	P0DMV8	641 aa	Known RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	HSPA1B	P0DMV9	641 aa	Known RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	EZR	P15311	586 aa	Known RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	RFC2	P35250	354 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	CPOX	P36551	454 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	CCR10	P46092	362 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	ASPH	Q12797	758 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	ZNF177	Q13360	481 aa	Predicted RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	FAM83E	Q2M2I3	478 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	TECRL	Q5HYJ1	363 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	CFAP157	Q5JU67	520 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	CXorf57	Q6NSI4	855 aa	Known RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	LDB1	Q86U70	411 aa	Predicted RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	TXNDC5	Q8NBS9	432 aa	Known RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	TTC8	Q8TAM2	541 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	BLOC1S5	Q8TDH9	187 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	DNAJC1	Q96KC8	554 aa	Known RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	ZFR	Q96KR1	1074 aa	Known RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	NOP53	Q9NZM5	478 aa	Known RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	NKX1-2	Q9UD57	310 aa	Predicted RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	ZDHHC2	Q9UIJ5	367 aa		12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.43	□□□□□ -0.42
SPIDR-210	ENST00000519362	ABHD14A-ACY1	A0A1B0GW23	586 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	CCDC162P	A2VCL2	907 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	HDAC3	O15379	428 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	INSIG1	O15503	277 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	GRID2	O43424	1007 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	RPP40	O75818	363 aa	Known RBP	12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	ANP32D	O95626	131 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	GOT2	P00505	430 aa	Known RBP	12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	F11	P03951	625 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	LTA4H	P09960	611 aa	Known RBP	12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	TPBGL	P0DKB5	382 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	TFEB	P19484	476 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	ATP5F1	P24539	256 aa	Predicted RBP	12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	PGM1	P36871	562 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	SLC26A3	P40879	764 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	CDKN2D	P55273	166 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	PFKP	Q01813	784 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	TWF1	Q12792	350 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	CSHL1	Q14406	222 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	PTPRCAP	Q14761	206 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	VEPH1	Q14D04	833 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	CYTH1	Q15438	398 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	TAF12	Q16514	161 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	DNAL1	Q4LDG9	190 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	SPOUT1	Q5T280	376 aa	Known RBP	12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	AGAP9	Q5VTM2	703 aa		12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12.42	□□□□□ -0.42
SPIDR-210	ENST00000519362	TCEAL8	Q8IYN2	117 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms