RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ZNF367Q7RTV3 350 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 CTU1Q7Z7A3 348 aaKnown RBP4.65□□□□□ -1.67
SQLE-202ENST00000518604 PXKQ7Z7A4 578 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 DHX40Q8IX18 779 aaKnown RBP4.65□□□□□ -1.67
SQLE-202ENST00000518604 MB21D2Q8IYB1 491 aaPredicted RBP4.65□□□□□ -1.67
SQLE-202ENST00000518604 CNTROBQ8N137 903 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 ANKRD52Q8NB46 1076 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 KCNG4Q8TDN1 519 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 PSPC1Q8WXF1 523 aaKnown RBP4.65□□□□□ -1.67
SQLE-202ENST00000518604 NUF2Q9BZD4 464 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 FAM234AQ9H0X4 552 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 MAGEE1Q9HCI5 957 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 BPIFA1Q9NP55 256 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 BLOC1S4Q9NUP1 217 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 HIF1ANQ9NWT6 349 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 LSM4Q9Y4Z0 139 aaKnown RBP4.65□□□□□ -1.67
SQLE-202ENST00000518604 LYVE1Q9Y5Y7 322 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 KCNE2Q9Y6J6 123 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 SQORQ9Y6N5 450 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 PIAS3Q9Y6X2 628 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 RUSC2Q8N2Y8 1516 aa4.65□□□□□ -1.67
SQLE-202ENST00000518604 MYMKA6NI61 221 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 I6L893 689 aaPredicted RBP4.64□□□□□ -1.67
SQLE-202ENST00000518604 PAGE4O60829 102 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 TOMM40O96008 361 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 LCATP04180 440 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 EIF2S1P05198 315 aaKnown RBP4.64□□□□□ -1.67
SQLE-202ENST00000518604 CBSLP0DN79 551 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 ETFAP13804 333 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 HOXB2P14652 356 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 NAGAP17050 411 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 HOXD3P31249 432 aaPredicted RBP4.64□□□□□ -1.67
SQLE-202ENST00000518604 CBSP35520 551 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 RAD23BP54727 409 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 FSCBQ5H9T9 825 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 SNX30Q5VWJ9 437 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 Q6ZSV7 163 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 LINGO2Q7L985 606 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 TECPR1Q7Z6L1 1165 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 PCGF5Q86SE9 256 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 PARP16Q8N5Y8 322 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 TMEM116Q8NCL8 245 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 BEST2Q8NFU1 509 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 ARHGEF2Q92974 986 aaKnown RBP4.64□□□□□ -1.67
SQLE-202ENST00000518604 GTF3C6Q969F1 213 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 TIGD1Q96MW7 591 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 ZNF48Q96MX3 618 aaPredicted RBP4.64□□□□□ -1.67
SQLE-202ENST00000518604 MMTAG2Q9BU76 263 aaKnown RBP4.64□□□□□ -1.67
SQLE-202ENST00000518604 RBM38Q9H0Z9 239 aaKnown RBP4.64□□□□□ -1.67
SQLE-202ENST00000518604 PLEKHA5Q9HAU0 1116 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 FBRSL1Q9HCM7 1045 aaKnown RBP4.64□□□□□ -1.67
SQLE-202ENST00000518604 CYSLTR2Q9NS75 346 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 PLK2Q9NYY3 685 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 DLGAP2Q9P1A6 1054 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 CTNNAL1Q9UBT7 734 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 SLCO3A1Q9UIG8 710 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 SLC45A1Q9Y2W3 748 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 AAR2Q9Y312 384 aaKnown RBP4.64□□□□□ -1.67
SQLE-202ENST00000518604 CAPN7Q9Y6W3 813 aa4.64□□□□□ -1.67
SQLE-202ENST00000518604 ANKRD18BA2A2Z9 1011 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 OR6C75A6NL08 312 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 WNT9BO14905 357 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 ITM2AO43736 263 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 LIASO43766 372 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 RGS11O94810 467 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 OAZ2O95190 189 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 CRYABP02511 175 aaKnown RBP4.63□□□□□ -1.67
SQLE-202ENST00000518604 ITGAXP20702 1163 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 EDN2P20800 178 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 NFKBIAP25963 317 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 SHMT1P34896 483 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 THPOP40225 353 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 PIP4K2AP48426 406 aaPredicted RBP4.63□□□□□ -1.67
SQLE-202ENST00000518604 PRAMEP78395 509 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 CSTF3Q12996 717 aaKnown RBP4.63□□□□□ -1.67
SQLE-202ENST00000518604 GRIK3Q13003 919 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 TRAF1Q13077 416 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 NEDD9Q14511 834 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 FGFBP1Q14512 234 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 ZNF284Q2VY69 593 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 USP41Q3LFD5 358 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 SGO1Q5FBB7 561 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 FNBP1LQ5T0N5 605 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 GPATCH4Q5T3I0 446 aaKnown RBP4.63□□□□□ -1.67
SQLE-202ENST00000518604 DAB2IPQ5VWQ8 1189 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 PLEKHA7Q6IQ23 1121 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 NCEH1Q6PIU2 408 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 SARM1Q6SZW1 724 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 TDRPQ86YL5 185 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 FRMD1Q8N878 549 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 SCCPDHQ8NBX0 429 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 POMGNT1Q8WZA1 660 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 TRIB2Q92519 343 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 SGCDQ92629 289 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 USP6NLQ92738 828 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 APOLD1Q96LR9 279 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 ZNF570Q96NI8 536 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 CHCHD6Q9BRQ6 235 aa4.63□□□□□ -1.67
SQLE-202ENST00000518604 SF3B5Q9BWJ5 86 aaKnown RBP4.63□□□□□ -1.67
SQLE-202ENST00000518604 SLC6A13Q9NSD5 602 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms