RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 NIPA2Q8N8Q9 360 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 KCTD6Q8NC69 237 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 TEKT4Q8WW24 435 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 ALKBH8Q96BT7 664 aaKnown RBP6.21□□□□□ -1.42
MRPS28-203ENST00000518371 CELF6Q96J87 481 aaKnown RBP6.21□□□□□ -1.42
MRPS28-203ENST00000518371 OSBPL1AQ9BXW6 950 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 ACE2Q9BYF1 805 aaPredicted RBP6.21□□□□□ -1.42
MRPS28-203ENST00000518371 BTBD1Q9H0C5 482 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 TNKS2Q9H2K2 1166 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 PABPC3Q9H361 631 aaKnown RBP6.21□□□□□ -1.42
MRPS28-203ENST00000518371 SGK2Q9HBY8 427 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 CD93Q9NPY3 652 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 VPS45Q9NRW7 570 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 SEMA4GQ9NTN9 838 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.21□□□□□ -1.42
MRPS28-203ENST00000518371 CWC15Q9P013 229 aaKnown RBP6.21□□□□□ -1.42
MRPS28-203ENST00000518371 USP36Q9P275 1121 aaKnown RBP6.21□□□□□ -1.42
MRPS28-203ENST00000518371 IMPACTQ9P2X3 320 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 ZNF212Q9UDV6 495 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 INTUQ9ULD6 942 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 HS3ST2Q9Y278 367 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 PCDHA13Q9Y5I0 950 aa6.21□□□□□ -1.42
MRPS28-203ENST00000518371 EPN1Q9Y6I3 576 aaPredicted RBP6.21□□□□□ -1.42
MRPS28-203ENST00000518371 EP300Q09472 2414 aaPredicted RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TBC1D3DA0A087WVF3 549 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TBC1D3IA0A087WXS9 549 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TBC1D3EA0A087X179 549 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TBC1D3KA0A087X1G2 549 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TMEM238LA0A1B0GVL6 79 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TBC1D3FA6NER0 549 aaPredicted RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ZSCAN5CA6NGD5 496 aaPredicted RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ARHGAP42A6NI28 874 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 LRRC72A6NJI9 287 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TBC1D3LB9A6J9 549 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 DFFAO00273 331 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 KPNA3O00505 521 aaPredicted RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ALOX15BO15296 676 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 SMAD6O43541 496 aaKnown RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 FOXD2O60548 495 aaPredicted RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 FSBPO95073 299 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 SEMA4FO95754 770 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 PRNPP04156 253 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 CFIP05156 583 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 KRT7P08729 469 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TBC1D3HP0C7X1 549 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ZNF806P0C7X5 589 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TNNT1P13805 278 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 RAB6AP20340 208 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ACSL1P33121 698 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ARHGAP25P42331 645 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 SERPINH1P50454 418 aaKnown RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 PAPOLAP51003 745 aaKnown RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 NDST2P52849 883 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 NAP1L1P55209 391 aaKnown RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 SNRPD1P62314 119 aaKnown RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ARF5P84085 180 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 RAD51Q06609 339 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 CCDC15Q0P6D6 951 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 SERINC3Q13530 473 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 PDK2Q15119 407 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ZNF124Q15973 351 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 CSRP2Q16527 193 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 DPYSL2Q16555 572 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 CPSF6Q16630 551 aaKnown RBP eCLIP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 POM121L1PQ3SYA9 428 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 PARP15Q460N3 678 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 AASDHQ4L235 1098 aaPredicted RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ATP13A4Q4VNC1 1196 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 DCAF12L1Q5VU92 463 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TBC1D3GQ6DHY5 549 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TXNRD3NBQ6F5E7 133 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TBC1D3CQ6IPX1 549 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 C22orf39Q6P5X5 142 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TMCO3Q6UWJ1 677 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 DPY19L3Q6ZPD9 716 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 USP30Q70CQ3 517 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 POLNQ7Z5Q5 900 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ZAR1Q86SH2 424 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 SYT12Q8IV01 421 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TBC1D3Q8IZP1 549 aaPredicted RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 LZTR1Q8N653 840 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 PCDH20Q8N6Y1 951 aaKnown RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 NETO2Q8NC67 525 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 CHST14Q8NCH0 376 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TMIEQ8NEW7 156 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 CADM4Q8NFZ8 388 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 OR2A12Q8NGT7 310 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 OR14C36Q8NHC7 312 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 CEP76Q8TAP6 659 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 PIP4K2CQ8TBX8 421 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 RFFLQ8WZ73 363 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 SNX19Q92543 992 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 HMCESQ96FZ2 354 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 ZNF419Q96HQ0 510 aaPredicted RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 HSPA12BQ96MM6 686 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 BAG1Q99933 345 aaPredicted RBP6.2□□□□□ -1.42
MRPS28-203ENST00000518371 HEPHQ9BQS7 1158 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 CALN1Q9BXU9 219 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 TM6SF2Q9BZW4 377 aa6.2□□□□□ -1.42
MRPS28-203ENST00000518371 CEP44Q9C0F1 390 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms