RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 MRPS23Q9Y3D9 190 aaKnown RBP11.86□□□□□ -0.51
SPIDR-203ENST00000517693 CCDC195A0A1B0GUA6 201 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 FAM95CA0A1B0GW59 222 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 A0A1W2PQ67 120 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 CCDC78A2IDD5 438 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 PLIN3O60664 434 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 DCTN3O75935 186 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 PENKP01210 267 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-203ENST00000517693 BPGMP07738 259 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 GRK2P25098 689 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 ARNTP27540 789 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 IRS1P35568 1242 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 RAB10P61026 200 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 SNRPD1P62314 119 aaKnown RBP11.86□□□□□ -0.51
SPIDR-203ENST00000517693 TMPRSS15P98073 1019 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 RAD51Q06609 339 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 LMAN2Q12907 356 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 IFT88Q13099 833 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 ZNF77Q15935 545 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 AARS2Q5JTZ9 985 aaKnown RBP11.86□□□□□ -0.51
SPIDR-203ENST00000517693 ARMC12Q5T9G4 340 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 RNF187Q5TA31 235 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-203ENST00000517693 FOXR1Q6PIV2 292 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 C6orf89Q6UWU4 347 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 CDHR3Q6ZTQ4 885 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 CILP2Q8IUL8 1156 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 OR13J1Q8NGT2 312 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 TTC8Q8TAM2 541 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 ATXN7L3BQ96GX2 97 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 C7orf26Q96N11 449 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 SIKE1Q9BRV8 207 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 CEP44Q9C0F1 390 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 ATP13A3Q9H7F0 1226 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 ACTR5Q9H9F9 607 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-203ENST00000517693 INTS10Q9NVR2 710 aaKnown RBP11.86□□□□□ -0.51
SPIDR-203ENST00000517693 NLE1Q9NVX2 485 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-203ENST00000517693 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-203ENST00000517693 SLC2A6Q9UGQ3 507 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 MSRAQ9UJ68 235 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 CHKBQ9Y259 395 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 MTO1Q9Y2Z2 717 aaKnown RBP11.86□□□□□ -0.51
SPIDR-203ENST00000517693 HCFC2Q9Y5Z7 792 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 USH1CQ9Y6N9 552 aa11.86□□□□□ -0.51
SPIDR-203ENST00000517693 WDR91A4D1P6 747 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 ANKRD66B4E2M5 251 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 PAPLNO95428 1278 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 AHSGP02765 367 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 C2P06681 752 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 LPOP22079 712 aaPredicted RBP11.85□□□□□ -0.51
SPIDR-203ENST00000517693 PSMA3P25788 255 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 RGRP47804 291 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 BCL2L1Q07817 233 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 CAMK1Q14012 370 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 SETDB1Q15047 1291 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 FAM45BPQ6NSW5 357 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 KLC3Q6P597 504 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 LINGO4Q6UY18 593 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 GRASPQ7Z6J2 395 aaPredicted RBP11.85□□□□□ -0.51
SPIDR-203ENST00000517693 CELF5Q8N6W0 485 aaKnown RBP11.85□□□□□ -0.51
SPIDR-203ENST00000517693 PAF1Q8N7H5 531 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 LPCAT1Q8NF37 534 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 FAM45AQ8TCE6 357 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 SMG7Q92540 1137 aaKnown RBP11.85□□□□□ -0.51
SPIDR-203ENST00000517693 IRF7Q92985 503 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 HDAC10Q969S8 669 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.85□□□□□ -0.51
SPIDR-203ENST00000517693 TCEAL4Q96EI5 215 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 MYO19Q96H55 970 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 ELMO2Q96JJ3 720 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 EXOC2Q96KP1 924 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 TUBGCP5Q96RT8 1024 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 TCF12Q99081 682 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 KDM4CQ9H3R0 1056 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 TLE6Q9H808 572 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 SPHK2Q9NRA0 654 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 CATSPERZQ9NTU4 200 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 MARK1Q9P0L2 795 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 SLC8A2Q9UPR5 921 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 ACOT9Q9Y305 439 aa11.85□□□□□ -0.51
SPIDR-203ENST00000517693 TTC24A2A3L6 582 aaPredicted RBP11.84□□□□□ -0.51
SPIDR-203ENST00000517693 GOLGA8TH3BQL2 631 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 SCAMP3O14828 347 aaKnown RBP11.84□□□□□ -0.51
SPIDR-203ENST00000517693 MOSPD3O75425 235 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 GSRP00390 522 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 ATP5BP06576 529 aaKnown RBP11.84□□□□□ -0.51
SPIDR-203ENST00000517693 BGNP21810 368 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 NFKBIAP25963 317 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 PMLP29590 882 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 SERPINA4P29622 427 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 PPARGP37231 505 aaPredicted RBP11.84□□□□□ -0.51
SPIDR-203ENST00000517693 SLC26A3P40879 764 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 ZNF140P52738 457 aaPredicted RBP11.84□□□□□ -0.51
SPIDR-203ENST00000517693 CTBP1Q13363 440 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 FASTKD1Q53R41 847 aaKnown RBP11.84□□□□□ -0.51
SPIDR-203ENST00000517693 PITRM1Q5JRX3 1037 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 TRPM8Q7Z2W7 1104 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 CMC1Q7Z7K0 106 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 CLEC14AQ86T13 490 aa11.84□□□□□ -0.51
SPIDR-203ENST00000517693 TBC1D1Q86TI0 1168 aaPredicted RBP11.84□□□□□ -0.51
SPIDR-203ENST00000517693 DENND6AQ8IWF6 608 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms