RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 FASTKD1Q53R41 847 aaKnown RBP0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 C2CD6Q53TS8 623 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 TRNP1Q6NT89 227 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 PWWP2BQ6NUJ5 590 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 KIAA0408Q6ZU52 694 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 RNF44Q7L0R7 432 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 NPM2Q86SE8 214 aaKnown RBP0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 DGKHQ86XP1 1220 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 CCDC28AQ8IWP9 274 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 CTAGE4Q8IX94 777 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 MCPH1Q8NEM0 835 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 MRGPRDQ8TDS7 321 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 GRAMD1AQ96CP6 724 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 NUP88Q99567 741 aaPredicted RBP0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 SDHCQ99643 169 aaPredicted RBP0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 IFT27Q9BW83 186 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 SCRT1Q9BWW7 348 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 LAT2Q9GZY6 243 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 SLITRK2Q9H156 845 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 SLKQ9H2G2 1235 aaPredicted RBP0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 TP63Q9H3D4 680 aaPredicted RBP0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 PCDH9Q9HC56 1237 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 FSCN3Q9NQT6 498 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 ADPRHL2Q9NX46 363 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 MAP3K20Q9NYL2 800 aaKnown RBP0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 CHPF2Q9P2E5 772 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 PADI1Q9ULC6 663 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 CDC14AQ9UNH5 594 aa0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 DHX57Q6P158 1386 aaKnown RBP0.42□□□□□ -2.34
SCARNA23-201ENST00000516060 TMEM247A6NEH6 219 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 EPM2AB3EWF7 344 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 FAM157AC9JC47 383 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 H0Y9J4 135 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 FRS3O43559 492 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 IGSF3O75054 1194 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 WDR1O75083 606 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 TAF5LO75529 589 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 NTSR2O95665 410 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 VIPP01282 170 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 MMP2P08253 660 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 S1PR1P21453 382 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 AARSP49588 968 aaKnown RBP eCLIP0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 OAZ1P54368 228 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 CSHL1Q14406 222 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 KIAA1644Q3SXP7 199 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 ZACNQ401N2 412 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 KRTCAP3Q53RY4 240 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 TMEM268Q5VZI3 342 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 RRAGBQ5VZM2 374 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 RAP1GAP2Q684P5 730 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 KRBA2Q6ZNG9 492 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 ASB18Q6ZVZ8 466 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 CHERPQ8IWX8 916 aaKnown RBP0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 POM121L12Q8N7R1 296 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 DUSP19Q8WTR2 217 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 ATOH1Q92858 354 aaPredicted RBP0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 ARHGEF26Q96DR7 871 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 TRAPPC9Q96Q05 1148 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 SYT17Q9BSW7 474 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 HDHD5Q9BXW7 423 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 PLA2G12AQ9BZM1 189 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 BICC1Q9H694 974 aaKnown RBP0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 MCM9Q9NXL9 1143 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 RAB21Q9UL25 225 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 TPCN1Q9ULQ1 816 aa0.41□□□□□ -2.34
SCARNA23-201ENST00000516060 UMODL1Q5DID0 1318 aa0.4□□□□□ -2.34
SCARNA23-201ENST00000516060 SMCHD1A6NHR9 2005 aa0.4□□□□□ -2.34
SCARNA23-201ENST00000516060 ARHGAP10A1A4S6 786 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 TARSL2A2RTX5 802 aaKnown RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 CFAP69A5D8W1 941 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 TRAFD1O14545 582 aaPredicted RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 SYNGR3O43761 229 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 TUSC2O75896 110 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 DUS4LO95620 317 aaKnown RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 HOXC4P09017 264 aaPredicted RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 FAM157CP0CG43 387 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 ACADMP11310 421 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 MYOD1P15172 320 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 VCAM1P19320 739 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 NFKBIAP25963 317 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 HNRNPH1P31943 449 aaKnown RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 STX2P32856 288 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 GNL1P36915 607 aaPredicted RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 HNF4AP41235 474 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 PIK3CBP42338 1070 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 FAM3BP58499 235 aaPredicted RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 RPL24P83731 157 aaKnown RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 ELAVL2Q12926 359 aaKnown RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 ARHGAP15Q53QZ3 475 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 PRR30Q53SZ7 412 aaPredicted RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 IFIT1BQ5T764 474 aaKnown RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 NSUN5P2Q63ZY6 315 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 MTFR2Q6P444 385 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 RNF144BQ7Z419 303 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 RNF113BQ8IZP6 322 aaKnown RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 ZNF611Q8N823 705 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 ENDOVQ8N8Q3 282 aaKnown RBP0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 KLHL30-AS1Q8NEE0 82 aa0.4□□□□□ -2.35
SCARNA23-201ENST00000516060 OR4N2Q8NGD1 307 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms