RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 TEKT4Q8WW24 435 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 SCG3Q8WXD2 468 aaKnown RBP13.77□□□□□ -0.21
TCOF1-215ENST00000515516 TBATAQ96M53 351 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 DEPDC7Q96QD5 511 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 KLF15Q9UIH9 416 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 SALL4Q9UJQ4 1053 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 RALYQ9UKM9 306 aaKnown RBP13.77□□□□□ -0.21
TCOF1-215ENST00000515516 GPSM3Q9Y4H4 160 aa13.77□□□□□ -0.21
TCOF1-215ENST00000515516 A0A1W2PQ67 120 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 CPED1A4D0V7 1026 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 CFAP69A5D8W1 941 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 OPA1O60313 960 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 PRKCGP05129 697 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 PCCBP05166 539 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 CYP1A2P05177 515 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 ELFN1P0C7U0 828 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 RARAP10276 462 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 MYF5P13349 255 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 MMP12P39900 470 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 RGRP47804 291 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 C1orf61Q13536 156 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 CDKN3Q16667 212 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 TSR1Q2NL82 804 aaKnown RBP13.76□□□□□ -0.21
TCOF1-215ENST00000515516 WSCD2Q2TBF2 565 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 SKOR2Q2VWA4 1001 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-215ENST00000515516 ZSCAN23Q3MJ62 389 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 TPRG1LQ5T0D9 272 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 ESRP1Q6NXG1 681 aaKnown RBP13.76□□□□□ -0.21
TCOF1-215ENST00000515516 ENPP7Q6UWV6 458 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 KDM7AQ6ZMT4 941 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 LRRC69Q6ZNQ3 347 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 FSTL5Q8N475 847 aaPredicted RBP13.76□□□□□ -0.21
TCOF1-215ENST00000515516 ATPAF2Q8N5M1 289 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 NIPA2Q8N8Q9 360 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 DCBLD1Q8N8Z6 715 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 BTBD6Q96KE9 485 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 DCBLD2Q96PD2 775 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 CSPG4P5Q96PW8 444 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 PSKH2Q96QS6 385 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 CAAP1Q9H8G2 361 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
TCOF1-215ENST00000515516 AKAP13Q12802 2813 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 A0A087X0T9 212 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 LMO7DNF2Z398 122 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 RRP8O43159 456 aaKnown RBP13.75□□□□□ -0.21
TCOF1-215ENST00000515516 CBFA2T2O43439 604 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 RASGRP1O95267 797 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 TPM1P09493 284 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 ALPIP09923 528 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 FAM228BP0C875 321 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 CDH6P55285 790 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 INPP5AQ14642 412 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 RTP5Q14D33 572 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 ELOCQ15369 112 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 EFL1Q7Z2Z2 1120 aaKnown RBP13.75□□□□□ -0.21
TCOF1-215ENST00000515516 RD3Q7Z3Z2 195 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 HID1Q8IV36 788 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 RBFAQ8N0V3 343 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 TPCN2Q8NHX9 752 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 PDCD6IPQ8WUM4 868 aaKnown RBP13.75□□□□□ -0.21
TCOF1-215ENST00000515516 APOOQ9BUR5 198 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 DEF6Q9H4E7 631 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 PCDH18Q9HCL0 1135 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 ZNHIT6Q9NWK9 470 aaKnown RBP13.75□□□□□ -0.21
TCOF1-215ENST00000515516 ASPMQ8IZT6 3477 aa13.75□□□□□ -0.21
TCOF1-215ENST00000515516 CACNB4O00305 520 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-215ENST00000515516 TNFP01375 233 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 GYPCP04921 128 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 TCF4P15884 667 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 TSHRP16473 764 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 CASP14P31944 242 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 ACTN2P35609 894 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 HK3P52790 923 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 SLC10A7Q0GE19 358 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 MTM1Q13496 603 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 NFATC4Q14934 902 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 ACOX1Q15067 660 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 AGERQ15109 404 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 COL28A1Q2UY09 1125 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 ZFYVE27Q5T4F4 411 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 MARC1Q5VT66 337 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 ZSWIM9Q86XI8 627 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 GKN2Q86XP6 184 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 LRRC49Q8IUZ0 686 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 TP53INP2Q8IXH6 220 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 ZNF564Q8TBZ8 553 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-215ENST00000515516 CTNNBL1Q8WYA6 563 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-215ENST00000515516 TSACCQ96A04 125 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-215ENST00000515516 ECHDC3Q96DC8 303 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 LRRC61Q9BV99 259 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 TCEAL2Q9H3H9 227 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-215ENST00000515516 ETNK2Q9NVF9 386 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 HAUS2Q9NVX0 235 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 CTTNBP2NLQ9P2B4 639 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 RCOR3Q9P2K3 495 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-215ENST00000515516 KLQ9UEF7 1012 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 LCMT1Q9UIC8 334 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 OR1A2Q9Y585 309 aa13.74□□□□□ -0.21
TCOF1-215ENST00000515516 ZFHX4Q86UP3 3567 aa13.73□□□□□ -0.21
TCOF1-215ENST00000515516 A0A087WV48 116 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms