RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CMTM8Q8IZV2 173 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 TDRD5Q8NAT2 981 aaKnown RBP10.28□□□□□ -0.76
SNF8-214ENST00000515174 CCT6BQ92526 530 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 PTPRN2Q92932 1015 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 OTUB2Q96DC9 234 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 IFT43Q96FT9 208 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 VPS39Q96JC1 886 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 LMLNQ96KR4 655 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 C7orf26Q96N11 449 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 PAIP2Q9BPZ3 127 aaKnown RBP10.28□□□□□ -0.76
SNF8-214ENST00000515174 C2orf49Q9BVC5 232 aaPredicted RBP10.28□□□□□ -0.76
SNF8-214ENST00000515174 SLC13A1Q9BZW2 595 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 MUC3BQ9H195 1237 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 KCNH6Q9H252 994 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 NOD2Q9HC29 1040 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 SNX15Q9NRS6 342 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 IARS2Q9NSE4 1012 aaKnown RBP10.28□□□□□ -0.76
SNF8-214ENST00000515174 SMPD4Q9NXE4 827 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 KLHL14Q9P2G3 628 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 TBC1D14Q9P2M4 693 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 MID2Q9UJV3 735 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 FBXO5Q9UKT4 447 aa10.28□□□□□ -0.76
SNF8-214ENST00000515174 RPL26L1Q9UNX3 145 aaKnown RBP10.28□□□□□ -0.76
SNF8-214ENST00000515174 A0A1W2PRU2 124 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 FZD6O60353 706 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 TSPAN3O60637 253 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 CLASP2O75122 1294 aaKnown RBP10.27□□□□□ -0.77
SNF8-214ENST00000515174 KIAA0754O94854 1291 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 CRTAMO95727 393 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 PRLP01236 227 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 PROCP04070 461 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 ATP5BP06576 529 aaKnown RBP10.27□□□□□ -0.77
SNF8-214ENST00000515174 C2P06681 752 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 CKMP06732 381 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 EPCAMP16422 314 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 GRK2P25098 689 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 SLC26A3P40879 764 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 CD151P48509 253 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 VASPP50552 380 aaPredicted RBP10.27□□□□□ -0.77
SNF8-214ENST00000515174 CLCN5P51795 746 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 CORO7P57737 925 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 AP1S1P61966 158 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 CYP4F8P98187 520 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 POU4F1Q01851 419 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 PPARDQ03181 441 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 CCDC15Q0P6D6 951 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 IFT88Q13099 833 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 DMC1Q14565 340 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 TAF1AQ15573 450 aaPredicted RBP10.27□□□□□ -0.77
SNF8-214ENST00000515174 ZKSCAN8Q15776 578 aaPredicted RBP10.27□□□□□ -0.77
SNF8-214ENST00000515174 PCSK7Q16549 785 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 ARHGAP15Q53QZ3 475 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 FSCBQ5H9T9 825 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 PRSS36Q5K4E3 855 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 CGB2Q6NT52 195 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 NCEH1Q6PIU2 408 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 SRLQ86TD4 932 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 NUDCD3Q8IVD9 361 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 PLPP6Q8IY26 295 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 OTUD6BQ8N6M0 293 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 OR13J1Q8NGT2 312 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 OR6Y1Q8NGX8 325 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 SHKBP1Q8TBC3 707 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 RDH11Q8TC12 318 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 ISG20Q96AZ6 181 aaKnown RBP10.27□□□□□ -0.77
SNF8-214ENST00000515174 TCF12Q99081 682 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 CORO1BQ9BR76 489 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 TDRD1Q9BXT4 1180 aaKnown RBP10.27□□□□□ -0.77
SNF8-214ENST00000515174 ADGRE3Q9BY15 652 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 LMAN2LQ9H0V9 348 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 ACTR5Q9H9F9 607 aaPredicted RBP10.27□□□□□ -0.77
SNF8-214ENST00000515174 ABCB8Q9NUT2 735 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 PCMTD2Q9NV79 361 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 HACD3Q9P035 362 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 CFAP97Q9P2B7 532 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 MTO1Q9Y2Z2 717 aaKnown RBP10.27□□□□□ -0.77
SNF8-214ENST00000515174 USH1CQ9Y6N9 552 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 COL4A3Q01955 1670 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 XIRP2A4UGR9 3374 aa10.27□□□□□ -0.77
SNF8-214ENST00000515174 A0A096LPK6 155 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.26□□□□□ -0.77
SNF8-214ENST00000515174 ANKRD66B4E2M5 251 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 H7C0S8 307 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 CBX4O00257 560 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 CCL16O15467 120 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 SNNO75324 88 aaPredicted RBP10.26□□□□□ -0.77
SNF8-214ENST00000515174 TMCC1O94876 653 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 PENKP01210 267 aaPredicted RBP10.26□□□□□ -0.77
SNF8-214ENST00000515174 CYBBP04839 570 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 PRKCGP05129 697 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 TROVE2P10155 538 aaKnown RBP eCLIP10.26□□□□□ -0.77
SNF8-214ENST00000515174 MYL4P12829 197 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 OGNP20774 298 aaKnown RBP10.26□□□□□ -0.77
SNF8-214ENST00000515174 MZF1P28698 734 aaPredicted RBP10.26□□□□□ -0.77
SNF8-214ENST00000515174 ALDH3A1P30838 453 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 CCR2P41597 374 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 CDH18Q13634 790 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 GALNTL6Q49A17 601 aa10.26□□□□□ -0.77
SNF8-214ENST00000515174 N4BP2L1Q5TBK1 243 aaPredicted RBP10.26□□□□□ -0.77
SNF8-214ENST00000515174 CCDC121Q6ZUS5 278 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms