RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 UNC5DQ6UXZ4 953 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 PHYKPLQ8IUZ5 450 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 ARL6IP6Q8N6S5 226 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 PPP4R1Q8TF05 950 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 ELMO3Q96BJ8 720 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 ASB9Q96DX5 294 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 GBP5Q96PP8 586 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 CDH19Q9H159 772 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 NANOGQ9H9S0 305 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 VPS45Q9NRW7 570 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 COPG2Q9UBF2 871 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 XPO7Q9UIA9 1087 aaKnown RBP7.48□□□□□ -1.21
CLIP1-205ENST00000514271 TCAF1Q9Y4C2 921 aa7.48□□□□□ -1.21
CLIP1-205ENST00000514271 NUP210Q8TEM1 1887 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 A6NJY4 79 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 MEI4A8MW99 385 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 SPECC1L-ADORA2AF8WAN1 911 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 H3BMQ9 156 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 MDM4O15151 490 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 GPR37O15354 613 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 AVILO75366 819 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ATE1O95260 518 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ENO1P06733 434 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 SNRPAP09012 282 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 TGM1P22735 817 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 TPP2P29144 1249 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 PMLP29590 882 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 RFC1P35251 1148 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 SCNN1AP37088 669 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 GRIA3P42263 894 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 HSPA13P48723 471 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ACOT2P49753 483 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 RABGGTBP53611 331 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ADCY1Q08828 1119 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 CBX3Q13185 183 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 SLC9B1Q4ZJI4 515 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 PAN2Q504Q3 1202 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ZNF667Q5HYK9 610 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 KIAA0319Q5VV43 1072 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 KIAA1841Q6NSI8 718 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 MRPL43Q8N983 215 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 POF1BQ8WVV4 589 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 DHRS1Q96LJ7 313 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 COG8Q96MW5 612 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 QKIQ96PU8 341 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 HGH1Q9BTY7 390 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ENTPD7Q9NQZ7 604 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 MAN1C1Q9NR34 630 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 SAE1Q9UBE0 346 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 RSL24D1Q9UHA3 163 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ZCWPW2A0A1B0GU75 182 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 CALB1P05937 261 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 HTR1AP08908 422 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 POLR2IP36954 125 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 GPD2P43304 727 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ATP6V0D1P61421 351 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 TSPY1Q01534 308 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 C2CD6Q53TS8 623 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 SLC8B1Q6J4K2 584 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 C4orf22Q6V702 233 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 TMEM135Q86UB9 458 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 TEX19Q8NA77 164 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 PCYOX1LQ8NBM8 494 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 OR5B17Q8NGF7 314 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 SPPL2BQ8TCT7 592 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 IPCEF1Q8WWN9 437 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 PABPC5Q96DU9 382 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 VPS50Q96JG6 964 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 FAM84AQ96KN4 292 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 TNIP3Q96KP6 325 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 EGLN2Q96KS0 407 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ACBD6Q9BR61 282 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 THTPAQ9BU02 230 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 MROQ9BYG7 248 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 UNKQ9C0B0 810 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 AGPAT4Q9NRZ5 378 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 MIOSQ9NXC5 875 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 CDH9Q9ULB4 789 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 TMED5Q9Y3A6 229 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 KPNA7A9QM74 516 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 CST3P01034 146 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 NFICP08651 508 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 XRCC1P18887 633 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 TGM2P21980 687 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 PCMT1P22061 227 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 TNFSF9P41273 254 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 MAGEA11P43364 429 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ADARP55265 1226 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 TFAMQ00059 246 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ZNF829Q3KNS6 432 aaPredicted RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 LSM12Q3MHD2 195 aaKnown RBP7.47□□□□□ -1.21
CLIP1-205ENST00000514271 ZBED5Q49AG3 693 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 SPOPLQ6IQ16 392 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 C17orf80Q9BSJ5 609 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 SFXN1Q9H9B4 322 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 CORINQ9Y5Q5 1042 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 MTCH2Q9Y6C9 303 aa7.47□□□□□ -1.21
CLIP1-205ENST00000514271 MYOCOSA0A1B0GUC4 107 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 A6NCN8 305 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 POC1B-GALNT4F8VUJ3 575 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms