RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ZC3H14Q6PJT7 736 aaKnown RBP9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 KDELC1Q6UW63 502 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 LAYNQ6UX15 382 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 KDM7AQ6ZMT4 941 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 ARHGEF18Q6ZSZ5 1173 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 TTC7BQ86TV6 843 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 MAIP1Q8WWC4 291 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 MAGOHBQ96A72 148 aaKnown RBP9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 FAM131CQ96AQ9 280 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 LRIG1Q96JA1 1093 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 APOL2Q9BQE5 337 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 FICDQ9BVA6 458 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 HDAC8Q9BY41 377 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 DDX47Q9H0S4 455 aaKnown RBP9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 DUSP15Q9H1R2 295 aaPredicted RBP9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 PCDH9Q9HC56 1237 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 FZD3Q9NPG1 666 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 AMACRQ9UHK6 382 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 TTC7AQ9ULT0 858 aaPredicted RBP9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 COQ6Q9Y2Z9 468 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 FADS3Q9Y5Q0 445 aa9.87□□□□□ -0.83
TOPBP1-209ENST00000513818 DOCK9Q9BZ29 2069 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 SPAG17Q6Q759 2223 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TBC1D3DA0A087WVF3 549 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TBC1D3IA0A087WXS9 549 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TBC1D3EA0A087X179 549 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TBC1D3KA0A087X1G2 549 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 A0A1W2PQU0 124 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 CFAP69A5D8W1 941 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TBC1D3FA6NER0 549 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 C5orf60A6NFR6 353 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 NPIPB15A6NHN6 443 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 MEI4A8MW99 385 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TBC1D3LB9A6J9 549 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 NEMP1O14524 444 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 OPHN1O60890 802 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 USP12O75317 370 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 URI1O94763 535 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 PCDH8O95206 1070 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 PRLP01236 227 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 IGHV4-34P06331 123 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 ITGAVP06756 1048 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TBC1D3HP0C7X1 549 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 OXTRP30559 389 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 COILP38432 576 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 WNT3AP56704 352 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 FAM193AP78312 1265 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 MRPS25P82663 173 aaKnown RBP9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 NHLH1Q02575 133 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 C2orf54Q08AI8 447 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 RALGDSQ12967 914 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 GRM3Q14832 879 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 UGP2Q16851 508 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 ARMC12Q5T9G4 340 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 DENND2CQ68D51 928 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 KIAA0895LQ68EN5 471 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TBC1D3GQ6DHY5 549 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 ITPRIPL1Q6GPH6 555 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TBC1D3CQ6IPX1 549 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 SLC36A4Q6YBV0 504 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 LPCAT2Q7L5N7 544 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 GSTA5Q7RTV2 222 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TSPAN33Q86UF1 283 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 ZSCAN30Q86W11 494 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 KLHL7Q8IXQ5 586 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TBC1D3Q8IZP1 549 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 SLC25A41Q8N5S1 370 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 CCDC89Q8N998 374 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 OR2T34Q8NGX1 318 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 PIH1D2Q8WWB5 315 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TADA1Q96BN2 335 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 BIRC7Q96CA5 298 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 MRGPRX2Q96LB1 330 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 ZNF641Q96N77 438 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 FCRL5Q96RD9 977 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 VAT1Q99536 393 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 FERMT1Q9BQL6 677 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 FRMD8P1Q9BZ68 369 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 MIR1-1HGQ9H1L0 117 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 EPC1Q9H2F5 836 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 SMOC1Q9H4F8 434 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 EBF2Q9HAK2 575 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 SGK2Q9HBY8 427 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 FSCN3Q9NQT6 498 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 HAUS2Q9NVX0 235 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 PIH1D1Q9NWS0 290 aaKnown RBP9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 DKK3Q9UBP4 350 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 B4GALT6Q9UBX8 382 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 TRHDEQ9UKU6 1024 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 ZFR2Q9UPR6 939 aaKnown RBP9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 CA5BQ9Y2D0 317 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 BPTFQ12830 3046 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 WDR87Q6ZQQ6 2873 aa9.86□□□□□ -0.83
TOPBP1-209ENST00000513818 SDK1Q7Z5N4 2213 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 GOLGA6L10A0A0M3HER8 536 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 LRRC72A6NJI9 287 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 AREL1O15033 823 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 SLC7A4O43246 635 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 FZD6O60353 706 aa9.85□□□□□ -0.83
TOPBP1-209ENST00000513818 MMP20O60882 483 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms