RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 FHL5Q5TD97 284 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 SPECC1LQ69YQ0 1117 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 HIST2H2BCQ6DN03 193 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 TEX19Q8NA77 164 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 AGBL5Q8NDL9 886 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 OR56A4Q8NGH8 313 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 ART4Q93070 314 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 PDXPQ96GD0 296 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 SLC45A3Q96JT2 553 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 GDAP1L1Q96MZ0 367 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 GPN2Q9H9Y4 310 aaPredicted RBP12.67□□□□□ -0.38
DDX41-215ENST00000512431 SLC39A1Q9NY26 324 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 PPARGC1AQ9UBK2 798 aaKnown RBP12.67□□□□□ -0.38
DDX41-215ENST00000512431 DKK3Q9UBP4 350 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 VPS4AQ9UN37 437 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 PCDHGC3Q9UN70 934 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 RELNP78509 3460 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 NKX2-8O15522 239 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 B4GAT1O43505 415 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 TIMP2P16035 220 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 TFE3P19532 575 aaPredicted RBP12.66□□□□□ -0.38
DDX41-215ENST00000512431 OR1D5P58170 312 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 MC1RQ01726 317 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 PTK2Q05397 1052 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 MTM1Q13496 603 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
DDX41-215ENST00000512431 ATXN7L2Q5T6C5 722 aaPredicted RBP12.66□□□□□ -0.38
DDX41-215ENST00000512431 DCAF12Q5T6F0 453 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 OTUD1Q5VV17 481 aaPredicted RBP12.66□□□□□ -0.38
DDX41-215ENST00000512431 ERAP2Q6P179 960 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 ZNF354CQ86Y25 554 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 NRSN1Q8IZ57 195 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 NT5C3BQ969T7 300 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 HMCESQ96FZ2 354 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 DHTKD1Q96HY7 919 aaPredicted RBP12.66□□□□□ -0.38
DDX41-215ENST00000512431 CCDC74BQ96LY2 380 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 TBCBQ99426 244 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 NCAPGQ9BPX3 1015 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 TTYH3Q9C0H2 523 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 RETREG1Q9H6L5 497 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 ZNF212Q9UDV6 495 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 MOSPD1Q9UJG1 213 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.66□□□□□ -0.38
DDX41-215ENST00000512431 B3GALT1Q9Y5Z6 326 aa12.66□□□□□ -0.38
DDX41-215ENST00000512431 IGHV5-10-1A0A0J9YXX1 117 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 ZSCAN5CA6NGD5 496 aaPredicted RBP12.65□□□□□ -0.38
DDX41-215ENST00000512431 BUB1O43683 1085 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 MAP4P27816 1152 aaKnown RBP12.65□□□□□ -0.38
DDX41-215ENST00000512431 MAN1A1P33908 653 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 PPP1R2P41236 205 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 NOP2P46087 812 aaKnown RBP12.65□□□□□ -0.38
DDX41-215ENST00000512431 MAPKAPK2P49137 400 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 COPB1P53618 953 aaKnown RBP12.65□□□□□ -0.38
DDX41-215ENST00000512431 LIMK2P53671 638 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 RAB15P59190 212 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 CDC20Q12834 499 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 PKP1Q13835 747 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 ARHGAP44Q17R89 818 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 DEFB109BQ30KR1 87 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 CFAP58Q5T655 872 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 RWDD4Q6NW29 188 aaKnown RBP12.65□□□□□ -0.38
DDX41-215ENST00000512431 LEKR1Q6ZMV7 388 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 FAM129CQ86XR2 697 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 NLGN4XQ8N0W4 816 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 NLGN4YQ8NFZ3 816 aaPredicted RBP12.65□□□□□ -0.38
DDX41-215ENST00000512431 OR1E3Q8WZA6 343 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 SMARCE1Q969G3 411 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 NUDT22Q9BRQ3 303 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 TMEM168Q9H0V1 697 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 MAGEH1Q9H213 219 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 PDCL3Q9H2J4 239 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 DNAI1Q9UI46 699 aa12.65□□□□□ -0.38
DDX41-215ENST00000512431 TMEM202A6NGA9 273 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 EFCAB7A8K855 629 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 PDE2AO00408 941 aaPredicted RBP12.64□□□□□ -0.39
DDX41-215ENST00000512431 TNFRSF10CO14798 259 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 GNA14O95837 355 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 KRT7P08729 469 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 GPR3P46089 330 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 PPM1FP49593 454 aaPredicted RBP12.64□□□□□ -0.39
DDX41-215ENST00000512431 LIG3P49916 1009 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 ARSDP51689 593 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 MLLT10P55197 1068 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 KIAA1024LP59773 190 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 RHOAP61586 193 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 AGERQ15109 404 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 PTPN20Q4JDL3 420 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 FAM102AQ5T9C2 384 aaPredicted RBP12.64□□□□□ -0.39
DDX41-215ENST00000512431 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 KDELC2Q7Z4H8 507 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 HEATR4Q86WZ0 1026 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 SFTPA2Q8IWL1 248 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 EFCAB3Q8N7B9 438 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 OR4D9Q8NGE8 314 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 HCAR2Q8TDS4 363 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 ZDHHC1Q8WTX9 485 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 CASKIN2Q8WXE0 1202 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 TEFMQ96QE5 360 aaKnown RBP12.64□□□□□ -0.39
DDX41-215ENST00000512431 DPYSL5Q9BPU6 564 aa12.64□□□□□ -0.39
DDX41-215ENST00000512431 SCAND2PQ9GZW5 306 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms