RNA–Protein interactions for RNA: ENST00000512372.5

NR1I3-232, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-232ENST00000512372 HP1BP3Q5SSJ5 553 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-232ENST00000512372 ARMC12Q5T9G4 340 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 ZDHHC20Q5W0Z9 365 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 TANGO2Q6ICL3 276 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 LINGO4Q6UY18 593 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 EXOC3L1Q86VI1 746 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 KCNMB4Q86W47 210 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 TERB1Q8NA31 727 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 TTC16Q8NEE8 873 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 FRS2Q8WU20 508 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 MZB1Q8WU39 189 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 BHMTQ93088 406 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 ASIC4Q96FT7 647 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 MRGPRX3Q96LB0 322 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 MCCC1Q96RQ3 725 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-232ENST00000512372 MYADMQ96S97 322 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 SMC6Q96SB8 1091 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 TCF12Q99081 682 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 APOL2Q9BQE5 337 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 TRMT61BQ9BVS5 477 aaKnown RBP9.13□□□□□ -0.95
NR1I3-232ENST00000512372 CENPHQ9H3R5 247 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 POMKQ9H5K3 350 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 HPS4Q9NQG7 708 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 CHRAC1Q9NRG0 131 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 NLE1Q9NVX2 485 aaPredicted RBP9.13□□□□□ -0.95
NR1I3-232ENST00000512372 ELOVL2Q9NXB9 296 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.13□□□□□ -0.95
NR1I3-232ENST00000512372 DKK3Q9UBP4 350 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 ADAM21Q9UKJ8 722 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 CLEC4EQ9ULY5 219 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 VPS9D1Q9Y2B5 631 aa9.13□□□□□ -0.95
NR1I3-232ENST00000512372 FCF1Q9Y324 198 aaKnown RBP9.13□□□□□ -0.95
NR1I3-232ENST00000512372 CAPN8A6NHC0 703 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 ARNTLO00327 626 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 PFDN6O15212 129 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 SMAD6O43541 496 aaKnown RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 LDB2O43679 373 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 SHOX2O60902 331 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 RPP40O75818 363 aaKnown RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 SLC34A2O95436 690 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 MT-CO1P00395 513 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 GLULP15104 373 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 OGNP20774 298 aaKnown RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 CCNFP41002 786 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 CHRNA4P43681 627 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 SLCO1A2P46721 670 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 MLLT1Q03111 559 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 TRAF2Q12933 501 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 SMAD4Q13485 552 aaKnown RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 HTR4Q13639 388 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 THOC5Q13769 683 aaKnown RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 GRIN2CQ14957 1233 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 DLG2Q15700 870 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 DBN1Q16643 649 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 AARS2Q5JTZ9 985 aaKnown RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 DGKKQ5KSL6 1271 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 TEDDM1Q5T9Z0 273 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 TRMT10BQ6PF06 316 aaKnown RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 PACS1Q6VY07 963 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 LEKR1Q6ZMV7 388 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 CAPN12Q6ZSI9 719 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 USP45Q70EL2 814 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 CTAGE3PQ8IX95 158 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 PHTF2Q8N3S3 785 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 PPM1NQ8N819 430 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 DTX3LQ8TDB6 740 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 DNASE1L2Q92874 299 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 RMDN1Q96DB5 314 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 MFSD3Q96ES6 412 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 CABS1Q96KC9 395 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 FCRL3Q96P31 734 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 RBBP8Q99708 897 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 CDH19Q9H159 772 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 RHOJQ9H4E5 214 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 CCDC134Q9H6E4 229 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 C20orf96Q9NUD7 363 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 PHTF1Q9UMS5 762 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 PLA2G4CQ9UP65 541 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 STARD13Q9Y3M8 1113 aa9.12□□□□□ -0.95
NR1I3-232ENST00000512372 USP15Q9Y4E8 981 aaPredicted RBP9.12□□□□□ -0.95
NR1I3-232ENST00000512372 COL4A3Q01955 1670 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 KIAA1549LQ6ZVL6 1849 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 A0A0J9YYE9 177 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 EDDM13A0A1B0GTR0 161 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 FAM47DPA6NHR8 397 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 K7ERQ8 282 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 ZWINTO95229 277 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 TRBC1P01850 177 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 MT-ND3P03897 115 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 PRNPP04156 253 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 HNRNPLP14866 589 aaKnown RBP eCLIP9.11□□□□□ -0.95
NR1I3-232ENST00000512372 BRAFP15056 766 aa9.11□□□□□ -0.95
NR1I3-232ENST00000512372 ARSAP15289 507 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms