RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 UGP2Q16851 508 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 SEL1L3Q68CR1 1132 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 CES5AQ6NT32 575 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 FAM171BQ6P995 826 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 GJD3Q8N144 294 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 SLC25A41Q8N5S1 370 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.97□□□□□ -0.333e-6■□□□□ 10.1
HMGB2-205ENST00000511316 UBA3Q8TBC4 463 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 DCUN1D1Q96GG9 259 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 VAT1Q99536 393 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 ACBD6Q9BR61 282 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 LRRC3Q9BY71 257 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 IL22Q9GZX6 179 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 COG4Q9H9E3 785 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 UGT1A7Q9HAW7 530 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 UGT1A10Q9HAW8 530 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 UGT1A8Q9HAW9 530 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 SNX15Q9NRS6 342 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 HCFC1R1Q9NWW0 138 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 DTLQ9NZJ0 730 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 DNMT3BQ9UBC3 853 aaKnown RBP12.97□□□□□ -0.33
HMGB2-205ENST00000511316 DPP7Q9UHL4 492 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 TRPC5OSA6NMA1 111 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 TXNDC9O14530 226 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 MAP3K13O43283 966 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 ITM2AO43736 263 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 ASLP04424 464 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 HNRNPA1P09651 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
HMGB2-205ENST00000511316 FAM58BPP0C7Q3 252 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 CCDC166P0CW27 439 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 MTHFRP42898 656 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 RAB15P59190 212 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 NTHL1P78549 312 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.97□□□□□ -0.33
HMGB2-205ENST00000511316 PABPC1LQ4VXU2 614 aaKnown RBP12.97□□□□□ -0.33
HMGB2-205ENST00000511316 ITPRIPL1Q6GPH6 555 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 TRNP1Q6NT89 227 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 FRMD7Q6ZUT3 714 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 TMEM86AQ8N2M4 240 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 CATSPER2Q96P56 530 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 PGLYRP2Q96PD5 576 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 DDX50Q9BQ39 737 aaKnown RBP12.97□□□□□ -0.33
HMGB2-205ENST00000511316 MRPL45Q9BRJ2 306 aaKnown RBP12.97□□□□□ -0.33
HMGB2-205ENST00000511316 C8orf4Q9NR00 106 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 TRHDEQ9UKU6 1024 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 MAFFQ9ULX9 164 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 SLC27A5Q9Y2P5 690 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 DOCK8Q8NF50 2099 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 MYO10Q9HD67 2058 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 MYBPHLA2RUH7 354 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 MATN2O00339 956 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 CCL16O15467 120 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 DCXO43602 365 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 LYPLA1O75608 230 aaPredicted RBP12.96□□□□□ -0.33
HMGB2-205ENST00000511316 FAM163BP0C2L3 166 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 ME2P23368 584 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 RPL14P50914 215 aaKnown RBP12.96□□□□□ -0.33
HMGB2-205ENST00000511316 DLG1Q12959 904 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 RALGPS1Q5JS13 557 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 LIPMQ5VYY2 423 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 NCBP2-AS2Q69YL0 99 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 GRASPQ7Z6J2 395 aaPredicted RBP12.96□□□□□ -0.33
HMGB2-205ENST00000511316 CLEC14AQ86T13 490 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 MPP5Q8N3R9 675 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 TDRD5Q8NAT2 981 aaKnown RBP12.96□□□□□ -0.33
HMGB2-205ENST00000511316 GABPB2Q8TAK5 448 aaPredicted RBP12.96□□□□□ -0.33
HMGB2-205ENST00000511316 SMG7Q92540 1137 aaKnown RBP12.96□□□□□ -0.33
HMGB2-205ENST00000511316 CCDC124Q96CT7 223 aaKnown RBP12.96□□□□□ -0.33
HMGB2-205ENST00000511316 RIPOR3Q96MK2 946 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 NECTIN4Q96NY8 510 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 LPIN3Q9BQK8 851 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 EFHD1Q9BUP0 239 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 DRC3Q9H069 523 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 CYP4F11Q9HBI6 524 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 NMRAL1Q9HBL8 299 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 PNPOQ9NVS9 261 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.96□□□□□ -0.333e-9■■□□□ 12.1
HMGB2-205ENST00000511316 HMGXB4Q9UGU5 601 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 FAM50BQ9Y247 325 aa12.96□□□□□ -0.33
HMGB2-205ENST00000511316 C2CD4DB7Z1M9 353 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 RNF103O00237 685 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 HUS1O60921 280 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 MOSPD3O75425 235 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 SOAT2O75908 522 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 BCAS2O75934 225 aaPredicted RBP12.95□□□□□ -0.34
HMGB2-205ENST00000511316 STAMBPO95630 424 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 WARSP23381 471 aaKnown RBP12.95□□□□□ -0.34
HMGB2-205ENST00000511316 PIK3R1P27986 724 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 CCR2P41597 374 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 PSMD8P48556 350 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 NRLP54845 237 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 GBE1Q04446 702 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 PAFAH1B3Q15102 231 aaKnown RBP12.95□□□□□ -0.34
HMGB2-205ENST00000511316 SLC39A12Q504Y0 691 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 SH3PXD2AQ5TCZ1 1133 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 LPCAT4Q643R3 524 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 ZYG11AQ6WRX3 759 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 MAVSQ7Z434 540 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 TMEM135Q86UB9 458 aa12.95□□□□□ -0.34
HMGB2-205ENST00000511316 HPS6Q86YV9 775 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms