RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 O00370 1275 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 POLR1CO15160 346 aaPredicted RBP10.86□□□□□ -0.67
SNF8-207ENST00000509995 FBXO21O94952 628 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 IGLV3-25P01717 112 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 SNRPB2P08579 225 aaKnown RBP10.86□□□□□ -0.67
SNF8-207ENST00000509995 CD1EP15812 388 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 TIMP2P16035 220 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 CASP14P31944 242 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 GCLMP48507 274 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 CCL11P51671 97 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 BIRC2Q13490 618 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 INPP5AQ14642 412 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 WSCD2Q2TBF2 565 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 ZNF805Q5CZA5 627 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 EFHC1Q5JVL4 640 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 SYPL2Q5VXT5 272 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 ARHGAP22Q7Z5H3 698 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 SLC47A2Q86VL8 602 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 SLC9A9Q8IVB4 645 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 RHOT1Q8IXI2 618 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 CISD2Q8N5K1 135 aaKnown RBP10.86□□□□□ -0.67
SNF8-207ENST00000509995 ZDHHC1Q8WTX9 485 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 SLC35F5Q8WV83 523 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 FAM149B1Q96BN6 582 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 FAXDC2Q96IV6 333 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 CLIC6Q96NY7 704 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 PANK2Q9BZ23 570 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 CEP44Q9C0F1 390 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 SPATS2LQ9NUQ6 558 aaKnown RBP10.86□□□□□ -0.67
SNF8-207ENST00000509995 COPG2Q9UBF2 871 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 SLC12A6Q9UHW9 1150 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 FBXO2Q9UK22 296 aaPredicted RBP10.86□□□□□ -0.67
SNF8-207ENST00000509995 VANGL2Q9ULK5 521 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 KLF2Q9Y5W3 355 aaPredicted RBP10.86□□□□□ -0.67
SNF8-207ENST00000509995 VPS13CQ709C8 3753 aa10.86□□□□□ -0.67
SNF8-207ENST00000509995 MYO7BQ6PIF6 2116 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 CSPG4Q6UVK1 2322 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 TMEM202A6NGA9 273 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 BHMG1C9JSJ3 638 aaPredicted RBP10.85□□□□□ -0.67
SNF8-207ENST00000509995 H3BQV1 296 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 PRICKLE3O43900 615 aaPredicted RBP10.85□□□□□ -0.67
SNF8-207ENST00000509995 CEACAM4O75871 244 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 ECEL1O95672 775 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 TRUB2O95900 331 aaKnown RBP10.85□□□□□ -0.67
SNF8-207ENST00000509995 FGF1P05230 155 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 RHOCP08134 193 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 COX6B1P14854 86 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 CD19P15391 556 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 ZNF28P17035 718 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 BPIP17213 487 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 GKP32189 559 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 SERPINH1P50454 418 aaKnown RBP10.85□□□□□ -0.67
SNF8-207ENST00000509995 DNA2P51530 1060 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 CDH4P55283 916 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 GPLD1P80108 840 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 ART3Q13508 389 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 AUHQ13825 339 aaKnown RBP10.85□□□□□ -0.67
SNF8-207ENST00000509995 CARD16Q5EG05 197 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 SNAP47Q5SQN1 464 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 C6orf15Q6UXA7 325 aaPredicted RBP10.85□□□□□ -0.67
SNF8-207ENST00000509995 GALNT6Q8NCL4 622 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 ST6GALNAC3Q8NDV1 305 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 OR56A4Q8NGH8 313 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 TMEM174Q8WUU8 243 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 PATE1Q8WXA2 126 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 THAP4Q8WY91 577 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 RNF31Q96EP0 1072 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 ZSCAN31Q96LW9 406 aaPredicted RBP10.85□□□□□ -0.67
SNF8-207ENST00000509995 BARD1Q99728 777 aaKnown RBP10.85□□□□□ -0.67
SNF8-207ENST00000509995 WRAP53Q9BUR4 548 aaKnown RBP10.85□□□□□ -0.67
SNF8-207ENST00000509995 MIS12Q9H081 205 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 ING2Q9H160 280 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 COQ6Q9Y2Z9 468 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 DOCK4Q8N1I0 1966 aa10.85□□□□□ -0.67
SNF8-207ENST00000509995 RTTNQ86VV8 2226 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 A0A0D9SEW6 157 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 ARGFXA6NJG6 315 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 A8MU76 341 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 PPM1DO15297 605 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 TRIM49P0CI25 452 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 TRIM49CP0CI26 452 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 CAPN3P20807 821 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 GGCXP38435 758 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 VAMP7P51809 220 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 PPP3CAQ08209 521 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 EIF4EBP2Q13542 120 aaPredicted RBP10.84□□□□□ -0.67
SNF8-207ENST00000509995 DNASE1L3Q13609 305 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 UGT8Q16880 541 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 MIIPQ5JXC2 388 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 ANKRD40Q6AI12 368 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 BEND5Q7L4P6 421 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 OR6K2Q8NGY2 324 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 UBE2Q2Q8WVN8 375 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 SEC14L1Q92503 715 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 HDAC11Q96DB2 347 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 STAMBPL1Q96FJ0 436 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 EEF2KMTQ96G04 330 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 TMUB1Q9BVT8 246 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 TM6SF2Q9BZW4 377 aa10.84□□□□□ -0.67
SNF8-207ENST00000509995 LRRC27Q9C0I9 530 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms