RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 PPP6R3Q5H9R7 873 aaPredicted RBP13.44□□□□□ -0.26
SDHA-210ENST00000509420 ZCCHC8Q6NZY4 707 aaKnown RBP13.44□□□□□ -0.26
SDHA-210ENST00000509420 ZNF354CQ86Y25 554 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 PHACTR4Q8IZ21 702 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 CBARPQ8N350 705 aaPredicted RBP13.44□□□□□ -0.26
SDHA-210ENST00000509420 NIPA2Q8N8Q9 360 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 SNIP1Q8TAD8 396 aaKnown RBP13.44□□□□□ -0.26
SDHA-210ENST00000509420 FAM71BQ8TC56 605 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 CXorf40AQ8TE69 158 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 SYN2Q92777 582 aaPredicted RBP13.44□□□□□ -0.26
SDHA-210ENST00000509420 TBATAQ96M53 351 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 ZNF641Q96N77 438 aaPredicted RBP13.44□□□□□ -0.26
SDHA-210ENST00000509420 CSPG4P5Q96PW8 444 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 PSKH2Q96QS6 385 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 TUBGCP5Q96RT8 1024 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 THAP2Q9H0W7 228 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 MYO1AQ9UBC5 1043 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 ATP8A1Q9Y2Q0 1164 aa13.44□□□□□ -0.26
SDHA-210ENST00000509420 EME2A4GXA9 379 aaPredicted RBP13.43□□□□□ -0.26
SDHA-210ENST00000509420 ARHGAP42A6NI28 874 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 LMO7DNF2Z398 122 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 TPP1O14773 563 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 MAFKO60675 156 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 CYP1A2P05177 515 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 CD48P09326 243 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 RARAP10276 462 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 TSHRP16473 764 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 AMPD1P23109 780 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 SUOXP51687 545 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 DAB2P98082 770 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 IL10RBQ08334 325 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 NSUN2Q08J23 767 aaKnown RBP eCLIP13.43□□□□□ -0.26
SDHA-210ENST00000509420 PTPRRQ15256 657 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 CDKN3Q16667 212 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 BRAT1Q6PJG6 821 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 SFTPA2Q8IWL1 248 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 IFI44Q8TCB0 444 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 LMX1AQ8TE12 382 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 PRR11Q96HE9 360 aaPredicted RBP13.43□□□□□ -0.26
SDHA-210ENST00000509420 USP29Q9HBJ7 922 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 PCDH18Q9HCL0 1135 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 APOBEC3BQ9UH17 382 aaKnown RBP13.43□□□□□ -0.26
SDHA-210ENST00000509420 IPO11Q9UI26 975 aaKnown RBP13.43□□□□□ -0.26
SDHA-210ENST00000509420 RABGEF1Q9UJ41 708 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 OR1A2Q9Y585 309 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 SCINQ9Y6U3 715 aa13.43□□□□□ -0.26
SDHA-210ENST00000509420 SCN8AQ9UQD0 1980 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 TENM4Q6N022 2769 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 DFFAO00273 331 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 TOR1BO14657 336 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 YY2O15391 372 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 HTRA2O43464 458 aaPredicted RBP13.42□□□□□ -0.26
SDHA-210ENST00000509420 PRPSAP2O60256 369 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 PALMO75781 387 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 MYBL1P10243 752 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 ADKP55263 362 aaKnown RBP13.42□□□□□ -0.26
SDHA-210ENST00000509420 E2F1Q01094 437 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 RAD51Q06609 339 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 ELP6Q0PNE2 266 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 INPP5AQ14642 412 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 NFATC4Q14934 902 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 LRRC14Q15048 493 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 FILIP1LQ4L180 1135 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 PRRT3Q5FWE3 981 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 C6orf132Q5T0Z8 1188 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 LIPIQ6XZB0 460 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 DPPA4Q7L190 304 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 PDXPQ96GD0 296 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 HIC2Q96JB3 615 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 DUSP23Q9BVJ7 150 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 ASCL3Q9NQ33 180 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.42□□□□□ -0.26
SDHA-210ENST00000509420 CAPN11Q9UMQ6 739 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 RAI2Q9Y5P3 530 aa13.42□□□□□ -0.26
SDHA-210ENST00000509420 ARHGEF17Q96PE2 2063 aaPredicted RBP13.42□□□□□ -0.26
SDHA-210ENST00000509420 NEMP2A6NFY4 417 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 TMEM202A6NGA9 273 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 CSO75390 466 aaKnown RBP13.41□□□□□ -0.26
SDHA-210ENST00000509420 RNF8O76064 485 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 DXOO77932 396 aaKnown RBP13.41□□□□□ -0.26
SDHA-210ENST00000509420 SERPINC1P01008 464 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 FUCA1P04066 466 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 ALPPL2P10696 532 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 LHCGRP22888 699 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 PEX5P50542 639 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 HK3P52790 923 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 ZBED6P86452 979 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 TRAF2Q12933 501 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 MMRN1Q13201 1228 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 RFTN1Q14699 578 aaPredicted RBP13.41□□□□□ -0.26
SDHA-210ENST00000509420 LBRQ14739 615 aaKnown RBP13.41□□□□□ -0.26
SDHA-210ENST00000509420 GRM3Q14832 879 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 ACAP1Q15027 740 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 ASTE1Q2TB18 679 aaPredicted RBP13.41□□□□□ -0.26
SDHA-210ENST00000509420 TBC1D25Q3MII6 688 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 EFL1Q7Z2Z2 1120 aaKnown RBP13.41□□□□□ -0.26
SDHA-210ENST00000509420 KYQ8NBH2 561 aa13.41□□□□□ -0.26
SDHA-210ENST00000509420 PTCD2Q8WV60 388 aaKnown RBP13.41□□□□□ -0.26
SDHA-210ENST00000509420 TEKT4Q8WW24 435 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms