RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 LRRC46Q96FV0 321 aa2.19□□□□□ -2.06
XRCC4-204ENST00000509268 TWNKQ96RR1 684 aa2.19□□□□□ -2.06
XRCC4-204ENST00000509268 ATOH8Q96SQ7 321 aa2.19□□□□□ -2.06
XRCC4-204ENST00000509268 PAIP1Q9H074 479 aaKnown RBP2.19□□□□□ -2.06
XRCC4-204ENST00000509268 CCDC68Q9H2F9 335 aa2.19□□□□□ -2.06
XRCC4-204ENST00000509268 SAYSD1Q9NPB0 183 aa2.19□□□□□ -2.06
XRCC4-204ENST00000509268 ZFP57Q9NU63 452 aa2.19□□□□□ -2.06
XRCC4-204ENST00000509268 RGL1Q9NZL6 768 aa2.19□□□□□ -2.06
XRCC4-204ENST00000509268 ZNF212Q9UDV6 495 aa2.19□□□□□ -2.06
XRCC4-204ENST00000509268 ARHGAP26Q9UNA1 814 aa2.19□□□□□ -2.06
XRCC4-204ENST00000509268 FAM170AA1A519 330 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 B4DLN1 442 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 DKC1O60832 514 aaKnown RBP eCLIP2.18□□□□□ -2.06
XRCC4-204ENST00000509268 PTP4A3O75365 173 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 MTA2O94776 668 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 KAT7O95251 611 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 MLYCDO95822 493 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 ADRB2P07550 413 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 HNRNPA1P09651 372 aaKnown RBP eCLIP2.18□□□□□ -2.06
XRCC4-204ENST00000509268 CLK1P49759 484 aaKnown RBP2.18□□□□□ -2.06
XRCC4-204ENST00000509268 PAPOLAP51003 745 aaKnown RBP2.18□□□□□ -2.06
XRCC4-204ENST00000509268 ZNF132P52740 706 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 NAP1L1P55209 391 aaKnown RBP2.18□□□□□ -2.06
XRCC4-204ENST00000509268 SLC12A1Q13621 1099 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 ZNF239Q16600 458 aaKnown RBP2.18□□□□□ -2.06
XRCC4-204ENST00000509268 CFAP58Q5T655 872 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 MAP3K21Q5TCX8 1036 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 MFSD4BQ5TF39 518 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 ANKRD45Q5TZF3 282 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 ACAD10Q6JQN1 1059 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 WDR93Q6P2C0 686 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 RNF44Q7L0R7 432 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 CHD1LQ86WJ1 897 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 ADGRF3Q8IZF5 1079 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 CSGALNACT1Q8TDX6 532 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 AFG1LQ8WV93 481 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 RSPH1Q8WYR4 309 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 GOLGA1Q92805 767 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 TXNDC15Q96J42 360 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 RADILQ96JH8 1075 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 ADAD1Q96M93 576 aaKnown RBP2.18□□□□□ -2.06
XRCC4-204ENST00000509268 COG8Q96MW5 612 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 F2RL3Q96RI0 385 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 LITAFQ99732 161 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 DDX23Q9BUQ8 820 aaKnown RBP2.18□□□□□ -2.06
XRCC4-204ENST00000509268 EIF2AQ9BY44 585 aaKnown RBP2.18□□□□□ -2.06
XRCC4-204ENST00000509268 GPR63Q9BZJ6 419 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 TWSG1Q9GZX9 223 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 PABPC3Q9H361 631 aaKnown RBP2.18□□□□□ -2.06
XRCC4-204ENST00000509268 PRDM8Q9NQV8 689 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 ACAD8Q9UKU7 415 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 CNPY2Q9Y2B0 182 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 RNF215Q9Y6U7 377 aa2.18□□□□□ -2.06
XRCC4-204ENST00000509268 NPIPB11E5RHQ5 1161 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 M0QZQ0 153 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 PCDH17O14917 1159 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 GJB3O75712 270 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 ACTL6BO94805 426 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 TMEM63AO94886 807 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 TK1P04183 234 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 ITGA2BP08514 1039 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 CSF1P09603 554 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 ARP10275 920 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 ENO3P13929 434 aaPredicted RBP2.17□□□□□ -2.06
XRCC4-204ENST00000509268 PORP16435 677 aaPredicted RBP2.17□□□□□ -2.06
XRCC4-204ENST00000509268 ALOX12P18054 663 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 MYF6P23409 242 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 MXI1P50539 228 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 CDH12P55289 794 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 ACTR2P61160 394 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 GRIK2Q13002 908 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 BECN1Q14457 450 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 XKR9Q5GH70 373 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 SNX30Q5VWJ9 437 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 SLC30A6Q6NXT4 461 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 PLBD1Q6P4A8 553 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 KLHL17Q6TDP4 642 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 C16orf89Q6UX73 402 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 KIAA0408Q6ZU52 694 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 BBS12Q6ZW61 710 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 KRT28Q7Z3Y7 464 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 CCDC25Q86WR0 208 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 LRRC57Q8N9N7 239 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 CCDC191Q8NCU4 936 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 CMASQ8NFW8 434 aaPredicted RBP2.17□□□□□ -2.06
XRCC4-204ENST00000509268 LGALS12Q96DT0 336 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 MPHOSPH8Q99549 860 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 PRPF18Q99633 342 aaKnown RBP2.17□□□□□ -2.06
XRCC4-204ENST00000509268 SLF1Q9BQI6 1058 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 MAGEB5Q9BZ81 275 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 TXLNGYQ9BZA5 131 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 ACTR5Q9H9F9 607 aaPredicted RBP2.17□□□□□ -2.06
XRCC4-204ENST00000509268 FBRSL1Q9HCM7 1045 aaKnown RBP2.17□□□□□ -2.06
XRCC4-204ENST00000509268 KRT84Q9NSB2 600 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 ATP8A2Q9NTI2 1148 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 TBC1D23Q9NUY8 699 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 HAUS2Q9NVX0 235 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 HERC5Q9UII4 1024 aaKnown RBP2.17□□□□□ -2.06
XRCC4-204ENST00000509268 VPS28Q9UK41 221 aa2.17□□□□□ -2.06
XRCC4-204ENST00000509268 RSF1Q96T23 1441 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms