RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MYBL1P10243 752 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 RARAP10276 462 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 ALPPL2P10696 532 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 C6P13671 934 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 GM2AP17900 193 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 PCK1P35558 622 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 MMP12P39900 470 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 LIG3P49916 1009 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 SUOXP51687 545 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 THOP1P52888 689 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 SLC10A7Q0GE19 358 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 ELP6Q0PNE2 266 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 AGERQ15109 404 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 ZCCHC8Q6NZY4 707 aaKnown RBP16.34■□□□□ 0.21
LMNA-222ENST00000508500 POLNQ7Z5Q5 900 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 TUBGCP5Q96RT8 1024 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 DUSP23Q9BVJ7 150 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 THAP2Q9H0W7 228 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 RBSNQ9H1K0 784 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 MRPL47Q9HD33 250 aaKnown RBP16.34■□□□□ 0.21
LMNA-222ENST00000508500 DONSONQ9NYP3 566 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 APOBEC3BQ9UH17 382 aaKnown RBP16.34■□□□□ 0.21
LMNA-222ENST00000508500 SCN8AQ9UQD0 1980 aa16.33■□□□□ 0.21
LMNA-222ENST00000508500 A0A087X0T9 212 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 TPP1O14773 563 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 FAM228BP0C875 321 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 TGM2P21980 687 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 ADKP55263 362 aaKnown RBP16.33■□□□□ 0.2
LMNA-222ENST00000508500 UBASH3AP57075 661 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 NSUN2Q08J23 767 aaKnown RBP eCLIP16.33■□□□□ 0.2
LMNA-222ENST00000508500 PTK2BQ14289 1009 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 GRM3Q14832 879 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 LRRC14Q15048 493 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 CDKN3Q16667 212 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 HS1BP3Q53T59 392 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 TDRD12Q587J7 1177 aaKnown RBP16.33■□□□□ 0.2
LMNA-222ENST00000508500 PERM1Q5SV97 790 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 GUSBP11Q6P575 273 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 BRAT1Q6PJG6 821 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 MACC1Q6ZN28 852 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 CPNE8Q86YQ8 564 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 PGBD5Q8N414 524 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 PLA2G15Q8NCC3 412 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 IFI44Q8TCB0 444 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 CPLX3Q8WVH0 158 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 SYN2Q92777 582 aaPredicted RBP16.33■□□□□ 0.2
LMNA-222ENST00000508500 TRIM11Q96F44 468 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 PSKH2Q96QS6 385 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 BOCQ9BWV1 1114 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 SP110Q9HB58 689 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 SALL4Q9UJQ4 1053 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 CAPN11Q9UMQ6 739 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 NENFQ9UMX5 172 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 ATP8A1Q9Y2Q0 1164 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 AK5Q9Y6K8 562 aa16.33■□□□□ 0.2
LMNA-222ENST00000508500 EME2A4GXA9 379 aaPredicted RBP16.32■□□□□ 0.2
LMNA-222ENST00000508500 BRINP1O60477 761 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 GYPCP04921 128 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 GP1BAP07359 652 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 TSHRP16473 764 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 CR2P20023 1033 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 XPAP23025 273 aaPredicted RBP16.32■□□□□ 0.2
LMNA-222ENST00000508500 IL4RP24394 825 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 ITPKBP27987 946 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 EIF2S3P41091 472 aaKnown RBP16.32■□□□□ 0.2
LMNA-222ENST00000508500 SLC25A11Q02978 314 aaKnown RBP16.32■□□□□ 0.2
LMNA-222ENST00000508500 INPP5AQ14642 412 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 LBRQ14739 615 aaKnown RBP16.32■□□□□ 0.2
LMNA-222ENST00000508500 PRRT3Q5FWE3 981 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 SLC35F3Q8IY50 421 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 PELI3Q8N2H9 469 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 NIPA2Q8N8Q9 360 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 BTN2A2Q8WVV5 523 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 HSPH1Q92598 858 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 TSACCQ96A04 125 aaPredicted RBP16.32■□□□□ 0.2
LMNA-222ENST00000508500 DCBLD2Q96PD2 775 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 CSPG4P5Q96PW8 444 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.32■□□□□ 0.2
LMNA-222ENST00000508500 APOOQ9BUR5 198 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 CINPQ9BW66 212 aaPredicted RBP16.32■□□□□ 0.2
LMNA-222ENST00000508500 ZWILCHQ9H900 591 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 USP29Q9HBJ7 922 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 PCDH18Q9HCL0 1135 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 SPASTQ9UBP0 616 aa16.32■□□□□ 0.2
LMNA-222ENST00000508500 MGAQ8IWI9 3026 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 A0A1W2PNU3 283 aaPredicted RBP16.31■□□□□ 0.2
LMNA-222ENST00000508500 CPED1A4D0V7 1026 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 TOR1BO14657 336 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 YY2O15391 372 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 MAFKO60675 156 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 SERPING1P05155 500 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 CYP1A2P05177 515 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 SERPINA4P29622 427 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 PEX5P50542 639 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 SCNN1BP51168 640 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 DUSP3P51452 185 aaPredicted RBP16.31■□□□□ 0.2
LMNA-222ENST00000508500 ZNF135P52742 658 aaPredicted RBP16.31■□□□□ 0.2
LMNA-222ENST00000508500 ZBED6P86452 979 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 PPARDQ03181 441 aa16.31■□□□□ 0.2
LMNA-222ENST00000508500 PIGHQ14442 188 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms