RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 GDF3Q9NR23 364 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 FAM114A2Q9NRY5 505 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 GRHL1Q9NZI5 618 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 HACD3Q9P035 362 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 USP36Q9P275 1121 aaKnown RBP8.71□□□□□ -1.02
USP46-207ENST00000508499 ASIC3Q9UHC3 531 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 RIMKLBQ9ULI2 386 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 PHTF1Q9UMS5 762 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 RAI2Q9Y5P3 530 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 A0A0J9YYE9 177 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 AREL1O15033 823 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 GFRA3O60609 400 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 GPR37L1O60883 481 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 ALDH1A2O94788 518 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 HEXIM1O94992 359 aaKnown RBP8.7□□□□□ -1.02
USP46-207ENST00000508499 TRBC1P01850 177 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 APRTP07741 180 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 ATXN1LP0C7T5 689 aaKnown RBP8.7□□□□□ -1.02
USP46-207ENST00000508499 TDGF1P13385 188 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 ZNF30P17039 623 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 GABRG2P18507 467 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 DRD3P35462 400 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 RPL21P46778 160 aaKnown RBP8.7□□□□□ -1.02
USP46-207ENST00000508499 CXCL12P48061 93 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 RPS14P62263 151 aaKnown RBP8.7□□□□□ -1.02
USP46-207ENST00000508499 CREB5Q02930 508 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 KCNC4Q03721 635 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 CDH17Q12864 832 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 TRAF2Q12933 501 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 MTAPQ13126 283 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 AGERQ15109 404 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 UGP2Q16851 508 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 DENND5AQ6IQ26 1287 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 WDR93Q6P2C0 686 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 NEK5Q6P3R8 708 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 ZNF534Q76KX8 674 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 TMPRSS6Q8IU80 811 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 CAMK1DQ8IU85 385 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 RELL1Q8IUW5 271 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 FBXL6Q8N531 539 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 ZNF366Q8N895 744 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 DTX3LQ8TDB6 740 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 PRCCQ92733 491 aaPredicted RBP8.7□□□□□ -1.02
USP46-207ENST00000508499 NELL1Q92832 810 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 LRRC39Q96DD0 335 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 RANBP9Q96S59 729 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 TBL1YQ9BQ87 522 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 TRIM51Q9BSJ1 452 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 FSD1LQ9BXM9 530 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 FAM126AQ9BYI3 521 aaPredicted RBP8.7□□□□□ -1.02
USP46-207ENST00000508499 PCED1AQ9H1Q7 454 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 PABPC3Q9H361 631 aaKnown RBP8.7□□□□□ -1.02
USP46-207ENST00000508499 TRABDQ9H4I3 376 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 ZDHHC6Q9H6R6 413 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 ITM2CQ9NQX7 267 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 DMGDHQ9UI17 866 aaKnown RBP8.7□□□□□ -1.02
USP46-207ENST00000508499 SARDHQ9UL12 918 aa8.7□□□□□ -1.02
USP46-207ENST00000508499 TNRC6BQ9UPQ9 1833 aaKnown RBP8.69□□□□□ -1.02
USP46-207ENST00000508499 TTC28Q96AY4 2481 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 CAPN8A6NHC0 703 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 C16orf96A6NNT2 1141 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 UPK3BL1B0FP48 263 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 UPK3BL2E5RIL1 263 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 E7ESA3 106 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 E7EVH7 732 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 K7ESF4 209 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 PSMD11O00231 422 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 EIF3HO15372 352 aaKnown RBP eCLIP8.69□□□□□ -1.02
USP46-207ENST00000508499 ZNF217O75362 1048 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 GJB3O75712 270 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 APBB3O95704 486 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 UGT2B4P06133 528 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 PDHA1P08559 390 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 ADRB3P13945 408 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 NDUFV2P19404 249 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 MCM3P25205 808 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 OXTRP30559 389 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 SLC8A1P32418 973 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 TNNT3P45378 269 aaPredicted RBP8.69□□□□□ -1.02
USP46-207ENST00000508499 NPY2RP49146 381 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 NUMBP49757 651 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 NEK3P51956 506 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 BASP1P80723 227 aaKnown RBP8.69□□□□□ -1.02
USP46-207ENST00000508499 ELP6Q0PNE2 266 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 CALCOCO2Q13137 446 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 LAMB3Q13751 1172 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 TRIP13Q15645 432 aaPredicted RBP8.69□□□□□ -1.02
USP46-207ENST00000508499 ZNF528Q3MIS6 628 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 TTC31Q49AM3 519 aaPredicted RBP8.69□□□□□ -1.02
USP46-207ENST00000508499 SIRPB2Q5JXA9 342 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 PIP5KL1Q5T9C9 394 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 IZUMO3Q5VZ72 239 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 CEP128Q6ZU80 1094 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 ERN2Q76MJ5 926 aaKnown RBP8.69□□□□□ -1.02
USP46-207ENST00000508499 PRUNE1Q86TP1 453 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 MMAAQ8IVH4 418 aaKnown RBP8.69□□□□□ -1.02
USP46-207ENST00000508499 IFT20Q8IY31 132 aa8.69□□□□□ -1.02
USP46-207ENST00000508499 CBARPQ8N350 705 aaPredicted RBP8.69□□□□□ -1.02
USP46-207ENST00000508499 ZCCHC9Q8N567 271 aaKnown RBP8.69□□□□□ -1.02
USP46-207ENST00000508499 AADATQ8N5Z0 425 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms