RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CES2O00748 559 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 XPO1O14980 1071 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ATXN7O15265 892 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 VPS26AO75436 327 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SP9P0CG40 484 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PRKAR1AP10644 381 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MYCLP1P12525 358 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 EDNRBP24530 442 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 EPHB2P29323 1055 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 HNRNPH1P31943 449 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 EIF4A3P38919 411 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ESRRGP62508 458 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RPS21P63220 83 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PLIN5Q00G26 463 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 DHX9Q08211 1270 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MTAPQ13126 283 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 DDX39BQ13838 428 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 FLOT2Q14254 428 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PUM1Q14671 1186 aaKnown RBP eCLIP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 KLHL40Q2TBA0 621 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ALS2CLQ60I27 953 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MBLAC2Q68D91 279 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MZT2AQ6P582 158 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ZDHHC17Q8IUH5 632 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SCUBE3Q8IX30 993 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SNIP1Q8TAD8 396 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ETNPPLQ8TBG4 499 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ANKRD49Q8WVL7 239 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 METTL21AQ8WXB1 218 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TATDN2Q93075 761 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ADI1Q9BV57 179 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 FBRSQ9HAH7 460 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 LTB4R2Q9NPC1 389 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 GID8Q9NWU2 228 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RRN3Q9NYV6 651 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 WNT16Q9UBV4 365 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ZMAT5Q9UDW3 170 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 COQ6Q9Y2Z9 468 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 A0A1B0GUA9 196 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MTMR11A4FU01 709 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 O00370 1275 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MTSS1O43312 755 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CCNDBP1O95273 360 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 F9P00740 461 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 UQCRBP14927 111 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PLA2G5P39877 138 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RABIFP47224 123 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 E2F1Q01094 437 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 UGP2Q16851 508 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 FAM187BQ17R55 369 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 EFL1Q7Z2Z2 1120 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 GLT6D1Q7Z4J2 308 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MON1AQ86VX9 555 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CIR1Q86X95 450 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 DNAAF5Q86Y56 855 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 NAXDQ8IW45 347 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RHOT2Q8IXI1 618 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 OR8K3Q8NH51 312 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF461Q8TAF7 563 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 IFI44Q8TCB0 444 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CALML6Q8TD86 181 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MR1Q95460 341 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 FEM1CQ96JP0 617 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 HSPA12BQ96MM6 686 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SH3GL1Q99961 368 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RBM12Q9NTZ6 932 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 NKIRAS2Q9NYR9 191 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 HCSTQ9UBK5 93 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 VAV3Q9UKW4 847 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 DMTF1Q9Y222 760 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 REXO2Q9Y3B8 237 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 HEBP2Q9Y5Z4 205 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 AKAP6Q13023 2319 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 EXOC1LA0A1B0GW35 172 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CDC14CA4D256 554 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ABLIM1O14639 778 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PIM1P11309 404 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MASP1P48740 699 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RAB33AQ14088 237 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 DHCR24Q15392 516 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TSGA10IPQ3SY00 556 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 EMC10Q5UCC4 262 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RFWD3Q6PCD5 774 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SETD3Q86TU7 594 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RCOR2Q8IZ40 523 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF454Q8N9F8 522 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MAGEC3Q8TD91 643 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CRELD1Q96HD1 420 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 JSRP1Q96MG2 331 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ANKRD27Q96NW4 1050 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CLPBQ9H078 707 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 KLHL25Q9H0H3 589 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 KRCC1Q9NPI7 259 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PHPT1Q9NRX4 125 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CLIC5Q9NZA1 410 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 AHSPQ9NZD4 102 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SUCOQ9UBS9 1254 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CD84Q9UIB8 345 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PSME2Q9UL46 239 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 VPS4AQ9UN37 437 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms