RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 OR6Q1Q8NGQ2 317 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 RHOXF1Q8NHV9 184 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 FBXO27Q8NI29 283 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 ZNF461Q8TAF7 563 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 TRPM4Q8TD43 1214 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 CABLES1Q8TDN4 633 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 QRSL1Q9H0R6 528 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 MTRRQ9UBK8 725 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 GPN3Q9UHW5 284 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 NENFQ9UMX5 172 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 ARHGAP5Q13017 1502 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 OR6C74A6NCV1 312 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 FAM170BA6NMN3 283 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 USP17L13C9JLJ4 530 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 USP17L17D6RBQ6 530 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 H3BM21 787 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 DNALI1O14645 258 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 SCO1O75880 301 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 SERPINB2P05120 415 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 RB1P06400 928 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 MYL3P08590 195 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 HSPD1P10809 573 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 TMEM11P17152 192 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 ABCB4P21439 1286 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 HOXC12P31275 282 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 GRIA3P42263 894 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 GSTM5P46439 218 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 RPS5P46782 204 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 KCNJ5P48544 419 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 HK3P52790 923 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 ARL4CP56559 192 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 NKX3-2P78367 333 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 RBP5P82980 135 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 KCNAB2Q13303 367 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 KCNJ11Q14654 390 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 SMTNL2Q2TAL5 461 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 SUSD1Q6UWL2 747 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 HHIPL2Q6UWX4 724 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 ZNF782Q6ZMW2 699 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 SPOCD1Q6ZMY3 1216 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 SMYD4Q8IYR2 804 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 TCTE3Q8IZS6 198 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 ZNF540Q8NDQ6 660 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 OR4M2Q8NGB6 313 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 IGDCC4Q8TDY8 1250 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 PDCD6IPQ8WUM4 868 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 PRR11Q96HE9 360 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 MFSD14AQ96MC6 490 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 APBA2Q99767 749 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 GTPBP2Q9BX10 602 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC12A5Q9H2X9 1139 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 TRABDQ9H4I3 376 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 TDRD3Q9H7E2 651 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 CD320Q9NPF0 282 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 PAK1IP1Q9NWT1 392 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 DCTN4Q9UJW0 460 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 FBXO5Q9UKT4 447 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 HCN2Q9UL51 889 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 PCDHAC2Q9Y5I4 1007 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 AP1M2Q9Y6Q5 423 aa10.88□□□□□ -0.67
PDLIM5-210ENST00000508216 ACOD1A6NK06 481 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 HACD1B0YJ81 288 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 TRIM38O00635 465 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 TFECO14948 347 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 KIAA0355O15063 1070 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 UGT2B11O75310 529 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 TRIM3O75382 744 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 APOA4P06727 396 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 ENO1P06733 434 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 NFICP08651 508 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 CLEC2LP0C7M8 214 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 DHRS4L1P0CG22 281 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 FGFR1P11362 822 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 CSF2RAP15509 400 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 S100PP25815 95 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 GCAP28676 217 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 P2RY4P51582 365 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 EIF3EP60228 445 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 FAAP100Q0VG06 881 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 CAMK1Q14012 370 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 IKBKEQ14164 716 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 ZNF169Q14929 603 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 TCEAL1Q15170 157 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 CCNG2Q16589 344 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 HIST2H2ACQ16777 129 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 FAM47AQ5JRC9 791 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 RINT1Q6NUQ1 792 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 SEZ6L2Q6UXD5 910 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 PRSS48Q7RTY5 328 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 FBXO33Q7Z6M2 555 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 AACSQ86V21 672 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 AMIGO1Q86WK6 493 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 CATSPER3Q86XQ3 398 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 RBFAQ8N0V3 343 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 ZBTB44Q8NCP5 570 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 TRPV3Q8NET8 790 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 ST8SIA4Q92187 359 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 SLC22A18Q96BI1 424 aa10.87□□□□□ -0.67
PDLIM5-210ENST00000508216 DUS3LQ96G46 650 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms