RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 GPATCH2LQ9NWQ4 482 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 IP6K2Q9UHH9 426 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 LCMT1Q9UIC8 334 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 DFFAO00273 331 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 INSIG1O15503 277 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 ATMINO43313 823 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 SOCS5O75159 536 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 NEBLO76041 1014 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 DXOO77932 396 aaKnown RBP14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 PIGNO95427 931 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 SERPING1P05155 500 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 TPM3P06753 285 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 HOXC4P09017 264 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 C6P13671 934 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 CTSEP14091 401 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 MMP12P39900 470 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 MLLT3P42568 568 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 LSSP48449 732 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 HK3P52790 923 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 ERVPABLB-1P60509 514 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 ZBED6P86452 979 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 NFATC4Q14934 902 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 IRF4Q15306 451 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 CA9Q16790 459 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 TBC1D25Q3MII6 688 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 IGF2-ASQ6U949 168 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 TMCO3Q6UWJ1 677 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 KDM7AQ6ZMT4 941 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 GKN2Q86XP6 184 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 ARHGAP12Q8IWW6 846 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 ARFGAP1Q8N6T3 406 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 NIPA2Q8N8Q9 360 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 TSEN2Q8NCE0 465 aaKnown RBP14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 NAP1L5Q96NT1 182 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 PEBP4Q96S96 227 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 FUCA2Q9BTY2 467 aa14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 RCOR3Q9P2K3 495 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-203ENST00000507004 LY6G6EA0A0G2JKS1 128 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 TMX2-CTNND1H3BSU7 103 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 CACNB4O00305 520 aaPredicted RBP14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 KRT10P13645 584 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 LIG3P49916 1009 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 ADKP55263 362 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 UBASH3AP57075 661 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 DPYSQ14117 519 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 ZNF235Q14590 738 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 LBRQ14739 615 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 HADHQ16836 314 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 WSCD2Q2TBF2 565 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 DEFB133Q30KQ1 61 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 EFL1Q7Z2Z2 1120 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 CAMK1DQ8IU85 385 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 NDUFAF2Q8N183 169 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 ZNF248Q8NDW4 579 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 WDR92Q96MX6 357 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 DCBLD2Q96PD2 775 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 APOOQ9BUR5 198 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 LRRC61Q9BV99 259 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 POLR1BQ9H9Y6 1135 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 MBNL1Q9NR56 388 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 CWC15Q9P013 229 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 MYO1AQ9UBC5 1043 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 KLF15Q9UIH9 416 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 DGKBQ9Y6T7 804 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 U3KQA8 63 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 CFAP47Q6ZTR5 3102 aa14.52□□□□□ -0.09
HMGCS1-203ENST00000507004 MYLKQ15746 1914 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 ASPMQ8IZT6 3477 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 CPED1A4D0V7 1026 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 MYO1FO00160 1098 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 TNFRSF10CO14798 259 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 BRINP1O60477 761 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 BUB1BO60566 1050 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 CSO75390 466 aaKnown RBP14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 TNFP01375 233 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 ELFN1P0C7U0 828 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 TSHRP16473 764 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 SCNN1BP51168 640 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 UCNP55089 124 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 CDH6P55285 790 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 PCBP4P57723 403 aaKnown RBP14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 KIAA1024LP59773 190 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 FANCCQ00597 558 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 CDKN3Q16667 212 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 ISXQ2M1V0 245 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 LRRC73Q5JTD7 316 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 E4F1Q66K89 784 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 RBM44Q6ZP01 1051 aaKnown RBP14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 CYP4V2Q6ZWL3 525 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 DPPA4Q7L190 304 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 POLNQ7Z5Q5 900 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 ARL10Q8N8L6 244 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 CCDC97Q96F63 343 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 THSD1Q9NS62 852 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 KLQ9UEF7 1012 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 CAPN11Q9UMQ6 739 aa14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 LUC7L2Q9Y383 392 aaKnown RBP14.51□□□□□ -0.09
HMGCS1-203ENST00000507004 ZFYVE26Q68DK2 2539 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms