RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 TMA16Q96EY4 203 aaKnown RBP22.33■■□□□ 1.17
RNF4-207ENST00000506706 TBATAQ96M53 351 aa22.33■■□□□ 1.17
RNF4-207ENST00000506706 STN1Q9H668 368 aaKnown RBP22.33■■□□□ 1.17
RNF4-207ENST00000506706 LNPEPQ9UIQ6 1025 aa22.33■■□□□ 1.17
RNF4-207ENST00000506706 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.32■■□□□ 1.16
RNF4-207ENST00000506706 SCAMP3O14828 347 aaKnown RBP22.32■■□□□ 1.16
RNF4-207ENST00000506706 LRG1P02750 347 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 KRT16P08779 473 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 PRKAA2P54646 552 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 KRT72Q14CN4 511 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 RBM20Q5T481 1227 aaKnown RBP22.32■■□□□ 1.16
RNF4-207ENST00000506706 FSTL5Q8N475 847 aaPredicted RBP22.32■■□□□ 1.16
RNF4-207ENST00000506706 STYXQ8WUJ0 223 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 NXNL1Q96CM4 212 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 DNAJC1Q96KC8 554 aaKnown RBP22.32■■□□□ 1.16
RNF4-207ENST00000506706 RILPQ96NA2 401 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 NUDCD1Q96RS6 583 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 NMUR2Q9GZQ4 415 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 TRAFD1O14545 582 aaPredicted RBP22.32■■□□□ 1.16
RNF4-207ENST00000506706 CCDC22O60826 627 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 RPP40O75818 363 aaKnown RBP22.32■■□□□ 1.16
RNF4-207ENST00000506706 ARRB2P32121 409 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 KPNA2P52292 529 aaKnown RBP22.32■■□□□ 1.16
RNF4-207ENST00000506706 ZXDBP98169 803 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 CYP4F8P98187 520 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 FSCBQ5H9T9 825 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 NAPRTQ6XQN6 538 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 ATG14Q6ZNE5 492 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.32■■□□□ 1.16
RNF4-207ENST00000506706 TSPAN17Q96FV3 270 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 PRR11Q96HE9 360 aaPredicted RBP22.32■■□□□ 1.16
RNF4-207ENST00000506706 NSL1Q96IY1 281 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 NSMCE3Q96MG7 304 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 NDNQ99608 321 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 ARL8BQ9NVJ2 186 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 PNPOQ9NVS9 261 aa22.32■■□□□ 1.16
RNF4-207ENST00000506706 LSM7Q9UK45 103 aaKnown RBP22.32■■□□□ 1.16
RNF4-207ENST00000506706 OR51F1A6NGY5 319 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 LUC7L3O95232 432 aaKnown RBP22.31■■□□□ 1.16
RNF4-207ENST00000506706 CXCL14O95715 111 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 CRTAMO95727 393 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 HSPA4LO95757 839 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 GLP2RO95838 553 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 SBK3P0C264 359 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 PIRTP0C851 137 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 HTRA4P83105 476 aaPredicted RBP22.31■■□□□ 1.16
RNF4-207ENST00000506706 NSUN2Q08J23 767 aaKnown RBP eCLIP22.31■■□□□ 1.16
RNF4-207ENST00000506706 ILF2Q12905 390 aaKnown RBP22.31■■□□□ 1.16
RNF4-207ENST00000506706 LIPMQ5VYY2 423 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 CCDC149Q6ZUS6 474 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 GAREM2Q75VX8 874 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 TTC7BQ86TV6 843 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 RNF135Q8IUD6 432 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 RMDN1Q96DB5 314 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 GPR78Q96P69 363 aa22.31■■□□□ 1.16
RNF4-207ENST00000506706 TDRD1Q9BXT4 1180 aaKnown RBP22.31■■□□□ 1.16
RNF4-207ENST00000506706 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.3■■□□□ 1.16
RNF4-207ENST00000506706 GFRA2O00451 464 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 S1PR4O95977 384 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 LINC00271P0C7V0 271 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 MZF1P28698 734 aaPredicted RBP22.3■■□□□ 1.16
RNF4-207ENST00000506706 PTPN4P29074 926 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 HECTD2Q5U5R9 776 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 LILRA6Q6PI73 481 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 FAM217AQ8IXS0 508 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 KLHL23Q8NBE8 558 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 TTC8Q8TAM2 541 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 PTCD3Q96EY7 689 aaKnown RBP22.3■■□□□ 1.16
RNF4-207ENST00000506706 OLFM1Q99784 485 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 EBF4Q9BQW3 602 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 FEM1AQ9BSK4 669 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 GATA5Q9BWX5 397 aaPredicted RBP22.3■■□□□ 1.16
RNF4-207ENST00000506706 MARCH4Q9P2E8 410 aaPredicted RBP22.3■■□□□ 1.16
RNF4-207ENST00000506706 STK38LQ9Y2H1 464 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 TARM1B6A8C7 271 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 BUD23O43709 281 aaKnown RBP22.3■■□□□ 1.16
RNF4-207ENST00000506706 SNAP91O60641 907 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 ZMPSTE24O75844 475 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 TMCC1O94876 653 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 GOT2P00505 430 aaKnown RBP22.3■■□□□ 1.16
RNF4-207ENST00000506706 DLG1Q12959 904 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 MRNIPQ6NTE8 343 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 TMC7Q7Z402 723 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 TMC8Q8IU68 726 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 HS6ST3Q8IZP7 471 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 MAB21L3Q8N8X9 362 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 GPR150Q8NGU9 434 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 ZBED2Q9BTP6 218 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 SUDS3Q9H7L9 328 aaPredicted RBP22.3■■□□□ 1.16
RNF4-207ENST00000506706 DNAJC28Q9NX36 388 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 XPR1Q9UBH6 696 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 VPS28Q9UK41 221 aa22.3■■□□□ 1.16
RNF4-207ENST00000506706 CD3EAPO15446 510 aaKnown RBP22.29■■□□□ 1.16
RNF4-207ENST00000506706 CD160O95971 181 aa22.29■■□□□ 1.16
RNF4-207ENST00000506706 CKMP06732 381 aa22.29■■□□□ 1.16
RNF4-207ENST00000506706 ADH1AP07327 375 aa22.29■■□□□ 1.16
RNF4-207ENST00000506706 ALOX15P16050 662 aaPredicted RBP22.29■■□□□ 1.16
RNF4-207ENST00000506706 CDH18Q13634 790 aa22.29■■□□□ 1.16
RNF4-207ENST00000506706 PTPRCAPQ14761 206 aa22.29■■□□□ 1.16
RNF4-207ENST00000506706 INO80DQ53TQ3 878 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms