RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ZNF333Q96JL9 665 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 TIGD1Q96MW7 591 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 BBS4Q96RK4 519 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 YME1L1Q96TA2 773 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 H2AFJQ9BTM1 129 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 ITPAQ9BY32 194 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 KRTAP17-1Q9BYP8 105 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 MAP6D1Q9H9H5 199 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 EIF2B3Q9NR50 452 aaKnown RBP6.21□□□□□ -1.42
HERC4-213ENST00000506515 SPATS2LQ9NUQ6 558 aaKnown RBP6.21□□□□□ -1.42
HERC4-213ENST00000506515 HEY2Q9UBP5 337 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 LIMA1Q9UHB6 759 aaKnown RBP6.21□□□□□ -1.42
HERC4-213ENST00000506515 KCNE2Q9Y6J6 123 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 SCAF11Q99590 1463 aaKnown RBP6.21□□□□□ -1.42
HERC4-213ENST00000506515 FYCO1Q9BQS8 1478 aa6.21□□□□□ -1.42
HERC4-213ENST00000506515 CDK12Q9NYV4 1490 aaPredicted RBP6.21□□□□□ -1.42
HERC4-213ENST00000506515 SYCP2Q9BX26 1530 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 TMEM94Q12767 1356 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 KANK1Q14678 1352 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 NEURL4Q96JN8 1562 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 TTC36A6NLP5 189 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 EBAG9O00559 213 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 DOK2O60496 412 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 ATG13O75143 517 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 GFPT2O94808 682 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 IRF1P10914 325 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 ACADMP11310 421 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 TTKP33981 857 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 PTGER1P34995 402 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 PBX3P40426 434 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 MAMLD1Q13495 774 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 RNPS1Q15287 305 aaKnown RBP6.2□□□□□ -1.42
HERC4-213ENST00000506515 MED22Q15528 200 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 MORN5Q5VZ52 161 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 TXNDC8Q6A555 127 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 CFAP161Q6P656 301 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 KLHL24Q6TFL4 600 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 CAMK1DQ8IU85 385 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 DHX40Q8IX18 779 aaKnown RBP6.2□□□□□ -1.42
HERC4-213ENST00000506515 NANOGP1Q8N7R0 232 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 INTS12Q96CB8 462 aaKnown RBP6.2□□□□□ -1.42
HERC4-213ENST00000506515 COQ8BQ96D53 544 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 ZC3HAV1LQ96H79 300 aaKnown RBP6.2□□□□□ -1.42
HERC4-213ENST00000506515 ZFYVE19Q96K21 471 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 MVB12BQ9H7P6 319 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 PRKRIP1Q9H875 184 aaPredicted RBP6.2□□□□□ -1.42
HERC4-213ENST00000506515 SWAP70Q9UH65 585 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 INTS6Q9UL03 887 aaKnown RBP6.2□□□□□ -1.42
HERC4-213ENST00000506515 PCDHA12Q9UN75 941 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 FAM96BQ9Y3D0 163 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 CAPN7Q9Y6W3 813 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 ABCC3O15438 1527 aa6.2□□□□□ -1.42
HERC4-213ENST00000506515 TMEM272A0A1B0GTI8 110 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 HSPB2A8KAH6 182 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 EIF3CLB5ME19 914 aaKnown RBP6.19□□□□□ -1.42
HERC4-213ENST00000506515 KLRF2D3W0D1 207 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 AP3D1O14617 1153 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 ZC3H11AO75152 810 aaKnown RBP eCLIP6.19□□□□□ -1.42
HERC4-213ENST00000506515 NDUFB8O95169 186 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 CLDN7O95471 211 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 LDHCP07864 332 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 PCNAP12004 261 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 LAMP2P13473 410 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 RYKP34925 604 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 AVPR1AP37288 418 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 ABCG1P45844 678 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 PPP3CCP48454 512 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 DRG2P55039 364 aaKnown RBP6.19□□□□□ -1.42
HERC4-213ENST00000506515 OLR1P78380 273 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 RBMS2Q15434 407 aaKnown RBP6.19□□□□□ -1.42
HERC4-213ENST00000506515 HSPB2Q16082 182 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 CCNG2Q16589 344 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 HIST2H2ACQ16777 129 aaPredicted RBP6.19□□□□□ -1.42
HERC4-213ENST00000506515 FAM205BPQ63HN1 556 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 NUGGCQ68CJ6 796 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 HEPHL1Q6MZM0 1159 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 IKBIPQ70UQ0 350 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 SRRM1Q8IYB3 904 aaKnown RBP6.19□□□□□ -1.42
HERC4-213ENST00000506515 C16orf52Q8NHV5 167 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 GTF3C6Q969F1 213 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 PABPC5Q96DU9 382 aaKnown RBP6.19□□□□□ -1.42
HERC4-213ENST00000506515 SIN3AQ96ST3 1273 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 TREX2Q9BQ50 279 aaPredicted RBP6.19□□□□□ -1.42
HERC4-213ENST00000506515 TRMOQ9BU70 441 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 POLDIP3Q9BY77 421 aaKnown RBP6.19□□□□□ -1.42
HERC4-213ENST00000506515 SEPT11Q9NVA2 429 aaKnown RBP6.19□□□□□ -1.42
HERC4-213ENST00000506515 NCKIPSDQ9NZQ3 722 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 CORO1CQ9ULV4 474 aaPredicted RBP6.19□□□□□ -1.42
HERC4-213ENST00000506515 CARD8Q9Y2G2 431 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 SCINQ9Y6U3 715 aa6.19□□□□□ -1.42
HERC4-213ENST00000506515 INO80Q9ULG1 1556 aaPredicted RBP6.18□□□□□ -1.42
HERC4-213ENST00000506515 FAM237BA0A1B0GVD1 139 aa6.18□□□□□ -1.42
HERC4-213ENST00000506515 DYTNA2CJ06 578 aa6.18□□□□□ -1.42
HERC4-213ENST00000506515 NPIPB11E5RHQ5 1161 aa6.18□□□□□ -1.42
HERC4-213ENST00000506515 LIASO43766 372 aa6.18□□□□□ -1.42
HERC4-213ENST00000506515 HNRNPCL1O60812 293 aaKnown RBP6.18□□□□□ -1.42
HERC4-213ENST00000506515 PTP4A3O75365 173 aa6.18□□□□□ -1.42
HERC4-213ENST00000506515 FGBP02675 491 aa6.18□□□□□ -1.42
HERC4-213ENST00000506515 TFP02787 698 aa6.18□□□□□ -1.42
HERC4-213ENST00000506515 MMP3P08254 477 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms