RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TRIM22Q8IYM9 498 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 CRYBG2Q8N1P7 616 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 CFAP52Q8N1V2 620 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 CARNMT1Q8N4J0 409 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF557Q8N988 423 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM102Q8N9M5 508 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 HJURPQ8NCD3 748 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 SIMC1Q8NDZ2 872 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 SEC14L1Q92503 715 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 NR4A3Q92570 626 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 ERCC4Q92889 916 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 JAKMIP2Q96AA8 810 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 ELMO3Q96BJ8 720 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 STAMBPL1Q96FJ0 436 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 TWNKQ96RR1 684 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 CDK5RAP1Q96SZ6 601 aaKnown RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 DPYSL5Q9BPU6 564 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 WDR77Q9BQA1 342 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 REEP2Q9BRK0 252 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 MED10Q9BTT4 135 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 C19orf24Q9BVV8 132 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 GPR87Q9BY21 358 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 SPRTNQ9H040 489 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 NUCKS1Q9H1E3 243 aaKnown RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 ST6GALNAC4Q9H4F1 302 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 ZDHHC6Q9H6R6 413 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 ZNF395Q9H8N7 513 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 FGF22Q9HCT0 170 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 C1GALT1Q9NS00 363 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 FAM49BQ9NUQ9 324 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 OLAHQ9NV23 265 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 RBAKQ9NYW8 714 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 LARSQ9P2J5 1176 aaKnown RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 KCNN3Q9UGI6 736 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 XPO7Q9UIA9 1087 aaKnown RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 KCNG1Q9UIX4 513 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 PADI1Q9ULC6 663 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 DNM3Q9UQ16 869 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 BTRCQ9Y297 605 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 MED12Q93074 2177 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 HEATR5AQ86XA9 2040 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 FRMD3A2A2Y4 597 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 GOLGA8IPA6NC78 632 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM202A6NGA9 273 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 GOLGA8JA6NMD2 632 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 RHPN2P1A8MT19 583 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 K7ERQ8 282 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ADAM10O14672 748 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 SMAD6O43541 496 aaKnown RBP3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ACSL4O60488 711 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 SPAG6O75602 509 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 LEFTY1O75610 366 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 REC8O95072 547 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 FUCA1P04066 466 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 TPOP07202 933 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 CAPN1P07384 714 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ANKRD34CP0C6C1 535 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM191BP0C7N4 346 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 FAM200BP0CF97 657 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 FGF5P12034 268 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 SRCP12931 536 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 TIMP2P16035 220 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 PDGFRAP16234 1089 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 SCP2P22307 547 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 DNASE1P24855 282 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 MST1P26927 711 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 MSX1P28360 303 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 L1CAMP32004 1257 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 MCM7P33993 719 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 NEK3P51956 506 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 VAV2P52735 878 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 SOX8P57073 446 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 YWHAGP61981 247 aaKnown RBP eCLIP3.36□□□□□ -1.87
TCOF1-208ENST00000506063 GPLD1P80108 840 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 CDH18Q13634 790 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ATP1A4Q13733 1029 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 TOB2Q14106 344 aaPredicted RBP3.36□□□□□ -1.87
TCOF1-208ENST00000506063 DSG2Q14126 1118 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 C3AR1Q16581 482 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 HIF1AQ16665 826 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 WSCD2Q2TBF2 565 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 WDR72Q3MJ13 1102 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ARSIQ5FYB1 569 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 BMP2KLQ5H9B9 411 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 MS4A13Q5J8X5 152 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 SNAP47Q5SQN1 464 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 HYIQ5T013 277 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 RNF219Q5W0B1 726 aaPredicted RBP3.36□□□□□ -1.87
TCOF1-208ENST00000506063 B3GNTL1Q67FW5 361 aaPredicted RBP3.36□□□□□ -1.87
TCOF1-208ENST00000506063 FCRL6Q6DN72 434 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 PM20D1Q6GTS8 502 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 BHLHB9Q6PI77 547 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ENPP7Q6UWV6 458 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 PAMR1Q6UXH9 720 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 CHSY3Q70JA7 882 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 MED25Q71SY5 747 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 TRAPPC11Q7Z392 1133 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 CAMKMTQ7Z624 323 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 TAF8Q7Z7C8 310 aa3.36□□□□□ -1.87
TCOF1-208ENST00000506063 ZSCAN30Q86W11 494 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms