RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ARHGEF26Q96DR7 871 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 GDAP1L1Q96MZ0 367 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 EPAS1Q99814 870 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 AGPAT1Q99943 283 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 NCAPGQ9BPX3 1015 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 OSBPL1AQ9BXW6 950 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 EPN3Q9H201 632 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 ADNPQ9H2P0 1102 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 LIMA1Q9UHB6 759 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 PADI4Q9UM07 663 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 NEU3Q9UQ49 428 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 PCDHB11Q9Y5F2 797 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 LRRK2Q5S007 2527 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 ZFC3H1O60293 1989 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 CLEC18AA5D8T8 446 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 ZSCAN5CA6NGD5 496 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 KDELR3O43731 214 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 POP4O95707 220 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 ANXA6P08133 673 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 XPAP23025 273 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 THOP1P52888 689 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 ADKP55263 362 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 GSCP56915 257 aaPredicted RBP16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 RHOAP61586 193 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 FOXK1P85037 733 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 CLCA4Q14CN2 919 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 MYLK3Q32MK0 819 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 CLEC18BQ6UXF7 455 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 GDPD4Q6W3E5 623 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 MON1BQ7L1V2 547 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 B3GNT8Q7Z7M8 397 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 TTC7BQ86TV6 843 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 VASH2Q86V25 355 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 PLPP6Q8IY26 295 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 RTL3Q8N8U3 475 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 NETO2Q8NC67 525 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 CLEC18CQ8NCF0 446 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 CXorf40AQ8TE69 158 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 GFM1Q96RP9 751 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 CATSPERBQ9H7T0 1116 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 PISDQ9UG56 409 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 APOBEC3BQ9UH17 382 aaKnown RBP16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 BSNQ9UPA5 3926 aa16.19■□□□□ 0.18
PDLIM7-213ENST00000505074 CXorf51AA0A1B0GTR3 108 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 SIGLEC16A6NMB1 481 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 CCDC172P0C7W6 258 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 HGFP14210 728 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 CYP4F2P78329 520 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 C1QBPQ07021 282 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 SKIDA1Q1XH10 827 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 PRRT3Q5FWE3 981 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 CLEC17AQ6ZS10 378 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 RBM43Q6ZSC3 357 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 VPS36Q86VN1 386 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 FAM26EQ8N5C1 309 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 AOPEPQ8N6M6 819 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 EXOC2Q96KP1 924 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 TMEM74Q96NL1 305 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 PSMG3-AS1Q96PY0 264 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 FUCA2Q9BTY2 467 aa16.18■□□□□ 0.18
PDLIM7-213ENST00000505074 MYO9AB2RTY4 2548 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 TMCO5BA8MYB1 307 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 RASA4BC9J798 803 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 LMO7DNF2Z398 122 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 RASA4O43374 803 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 FERP16591 822 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 ZNF143P52747 638 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 TPI1P60174 286 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 RPL7AP62424 266 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 EIF2B5Q13144 721 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 C1orf61Q13536 156 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 IGFBP7Q16270 282 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 CFAP58Q5T655 872 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 RBFAQ8N0V3 343 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 PAF1Q8N7H5 531 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 DENND6BQ8NEG7 585 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 HTR3CQ8WXA8 447 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 HMCESQ96FZ2 354 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 TBATAQ96M53 351 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 LENG8Q96PV6 779 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 CNPY3Q9BT09 278 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 WRAP53Q9BUR4 548 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 C1QTNF7Q9BXJ2 289 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 C1QTNF2Q9BXJ5 285 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 FOXP3Q9BZS1 431 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 TTYH3Q9C0H2 523 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 FZD10Q9ULW2 581 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 UNC79Q9P2D8 2635 aa16.17■□□□□ 0.18
PDLIM7-213ENST00000505074 BLACEA4D250 179 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 ENO4A6NNW6 628 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 D6RAR5 112 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 SPINT1O43278 529 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 MMP20O60882 483 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 GCATO75600 419 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 TM7SF2O76062 418 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 TNFAIP3P21580 790 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 CCKBRP32239 447 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 CASRP41180 1078 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 PTK2BQ14289 1009 aa16.16■□□□□ 0.18
PDLIM7-213ENST00000505074 PARP15Q460N3 678 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms