RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	HMGB4	Q8WW32	186 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	RLN3	Q8WXF3	142 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	OR8D1	Q8WZ84	308 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SIPA1	Q96FS4	1042 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	FEM1C	Q96JP0	617 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	KLHL32	Q96NJ5	620 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	TRIM51	Q9BSJ1	452 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	OSBPL1A	Q9BXW6	950 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	MFRP	Q9BY79	579 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	TPSD1	Q9BZJ3	242 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ZDHHC6	Q9H6R6	413 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	EIF2B3	Q9NR50	452 aa	Known RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	UBP1	Q9NZI7	540 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	FZD4	Q9ULV1	537 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SCML1	Q9UN30	329 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ITM2B	Q9Y287	266 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PCDHB9	Q9Y5E1	797 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SPO11	Q9Y5K1	396 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	FADS3	Q9Y5Q0	445 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788		A0A1W2PP55	124 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788		F5H423	210 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SLC7A4	O43246	635 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	LDB2	O43679	373 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	USP12	O75317	370 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ZNF189	O75820	626 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SEC31A	O94979	1220 aa	Known RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	APBB3	O95704	486 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ADH1B	P00325	375 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SOD1	P00441	154 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	AGT	P01019	485 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	KRT14	P02533	472 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	C1QA	P02745	245 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PRKCG	P05129	697 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SERPINF2	P08697	491 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ALPI	P09923	528 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	BCKDHB	P21953	392 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	CA5A	P35218	305 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	HNF1B	P35680	557 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	RPL21	P46778	160 aa	Known RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PSMD8	P48556	350 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	DRG2	P55039	364 aa	Known RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	RPL26	P61254	145 aa	Known RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PPP2CB	P62714	309 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PPP2CA	P67775	309 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PTS	Q03393	145 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	CDK18	Q07002	472 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	BCL2L1	Q07817	233 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SRSF5	Q13243	272 aa	Known RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	TUBB2A	Q13885	445 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	DHX34	Q14147	1143 aa	Known RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	STARD3	Q14849	445 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	TRIP13	Q15645	432 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	POM121L1P	Q3SYA9	428 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	LRRC73	Q5JTD7	316 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SIRPB2	Q5JXA9	342 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	CCDC181	Q5TID7	509 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PEAR1	Q5VY43	1037 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SDE2	Q6IQ49	451 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	BRAT1	Q6PJG6	821 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ZDHHC24	Q6UX98	284 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ERN2	Q76MJ5	926 aa	Known RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	TECPR1	Q7Z6L1	1165 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	TSPAN33	Q86UF1	283 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	WDR5B	Q86VZ2	330 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ZNF354C	Q86Y25	554 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	CACUL1	Q86Y37	369 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	TTC30B	Q8N4P2	665 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	TSTD1	Q8NFU3	115 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PRCC	Q92733	491 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ZC3H10	Q96K80	434 aa	Known RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	KRT12	Q99456	494 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ERP44	Q9BS26	406 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	LRRC1	Q9BTT6	524 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	TUBB2B	Q9BVA1	445 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	C1QTNF1	Q9BXJ1	281 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ATP13A3	Q9H7F0	1226 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	POLM	Q9NP87	494 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PCDH12	Q9NPG4	1184 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	CASS4	Q9NQ75	786 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	GPR27	Q9NS67	375 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ZDHHC18	Q9NUE0	388 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	FBXL12	Q9NXK8	326 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	SEPT10	Q9P0V9	454 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PAK5	Q9P286	719 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	FAM153A	Q9UHL3	310 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	RPL26L1	Q9UNX3	145 aa	Known RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	CHKB	Q9Y259	395 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ARIH1	Q9Y4X5	557 aa	Predicted RBP	4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	PIKFYVE	Q9Y2I7	2098 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ADAMTS9	Q9P2N4	1935 aa		4.97	□□□□□ -1.61
LMNB1-208	ENST00000504788	ZFC3H1	O60293	1989 aa	Known RBP	4.96	□□□□□ -1.62
LMNB1-208	ENST00000504788	MROH6	A6NGR9	719 aa		4.96	□□□□□ -1.62
LMNB1-208	ENST00000504788	CAPN8	A6NHC0	703 aa		4.96	□□□□□ -1.62
LMNB1-208	ENST00000504788	ERI2	A8K979	691 aa	Known RBP	4.96	□□□□□ -1.62
LMNB1-208	ENST00000504788	AGAP14	A8MT82	685 aa		4.96	□□□□□ -1.62
LMNB1-208	ENST00000504788	UPK3BL1	B0FP48	263 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms