RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 A0A1W2PPM1 405 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 TLR5O60602 858 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 UMPSP11172 480 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 FLT3P36888 993 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 GSTM5P46439 218 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 SMARCB1Q12824 385 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 BROXQ5VW32 411 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 ZNF57Q68EA5 555 aaPredicted RBP16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 ABRAXAS1Q6UWZ7 409 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 GCNT7Q6ZNI0 430 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 HEATR4Q86WZ0 1026 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 XYLT1Q86Y38 959 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 OR52K2Q8NGK3 314 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 ST6GALNAC4Q9H4F1 302 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 SLC27A5Q9Y2P5 690 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 TRIM43BA6NCK2 446 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 KRT36O76013 467 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 BPGMP07738 259 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 CCNA2P20248 432 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 EPHA3P29320 983 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 HGSNATQ68CP4 663 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 RAET1GQ6H3X3 334 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 CACUL1Q86Y37 369 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 RBFAQ8N0V3 343 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 CACTIN-AS1Q8N1I8 211 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 ENKURQ8TC29 256 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 GLOD4Q9HC38 313 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 LRRC4CQ9HCJ2 640 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 ZFP14Q9HCL3 533 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 TBC1D30Q9Y2I9 924 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 GSTK1Q9Y2Q3 226 aa16.61■□□□□ 0.25
PCDHA1-203ENST00000504120 RNF225M0QZC1 329 aaPredicted RBP16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 NBNO60934 754 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 ENTPD5O75356 428 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 NUDT14O95848 222 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 ALOX12P18054 663 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 IDH2P48735 452 aaKnown RBP16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 SMIM11AP58511 58 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 PDK3Q15120 406 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 PSMD5Q16401 504 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 RINLQ6ZS11 566 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 TSPAN14Q8NG11 270 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 KLRG1Q96E93 195 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 NXF3Q9H4D5 531 aaKnown RBP16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 TMPRSS4Q9NRS4 437 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 LMO7Q8WWI1 1683 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 CILPO75339 1184 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 CCNE2O96020 404 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 SLURP2P0DP57 97 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 ADRA1BP35368 520 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 SMAD3P84022 425 aaKnown RBP16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 TUSC3Q13454 348 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 APTXQ7Z2E3 356 aaKnown RBP16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 RCN3Q96D15 328 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 CORO1BQ9BR76 489 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 PAGE1O75459 146 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 C4BPAP04003 597 aaKnown RBP16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 ADSSP30520 456 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 CSNK2BP67870 215 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 FKBP1BP68106 108 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 ZNF618Q5T7W0 954 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 C11orf88Q6PI97 169 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 GPR180Q86V85 440 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 CROCCP3Q8IVE0 287 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 OFCC1Q8IZS5 231 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 POMGNT2Q8NAT1 580 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 SLC44A1Q8WWI5 657 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 AHCYL2Q96HN2 611 aaKnown RBP16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 FAM124BQ9H5Z6 455 aaPredicted RBP16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 PARP4Q9UKK3 1724 aaKnown RBP16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 PDE9AO76083 593 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 ADH1AP07327 375 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 GALNT3Q14435 633 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 CCDC157Q569K6 752 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 XKR6Q5GH73 641 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 MFSD5Q6N075 450 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 PPP1R13LQ8WUF5 828 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 LRRN4Q8WUT4 740 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 Q96MT0 163 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 CSPG4P5Q96PW8 444 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 SLC4A5Q9BY07 1137 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 DIABLOQ9NR28 239 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 ZNF510Q9Y2H8 683 aa16.6■□□□□ 0.25
PCDHA1-203ENST00000504120 HNRNPLP14866 589 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 COPZ1P61923 177 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 TMEM139Q8IV31 216 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 ERVK-5Q9HDB9 667 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 VPS4AQ9UN37 437 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 COG5Q9UP83 839 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 CNTNAP1P78357 1384 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 PIAS1O75925 651 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 TGDSO95455 350 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 CRHR1P34998 444 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 ZNHIT3Q15649 155 aaPredicted RBP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 MARK2Q7KZI7 788 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 ALYREFQ86V81 257 aaKnown RBP16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 LINGO1Q96FE5 620 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 CPXM1Q96SM3 734 aa16.59■□□□□ 0.25
PCDHA1-203ENST00000504120 NUAK2Q9H093 628 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms