RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 CYP46A1Q9Y6A2 500 aa4.22□□□□□ -1.73
SUB1-204ENST00000504016 CLEC18AA5D8T8 446 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 CBY3A6NI87 242 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 TIMM23O14925 209 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 COX7A2P14406 83 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 ZNF8P17098 575 aaPredicted RBP4.21□□□□□ -1.74
SUB1-204ENST00000504016 RYKP34925 604 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 BLKP51451 505 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 ERVFC1-1P60608 527 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 DDR1Q08345 913 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 FAM27E3Q08E93 113 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 GRIK3Q13003 919 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 ITGADQ13349 1161 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 ESCO2Q56NI9 601 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 SPSB3Q6PJ21 355 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 FBXO46Q6PJ61 603 aaPredicted RBP4.21□□□□□ -1.74
SUB1-204ENST00000504016 MMS22LQ6ZRQ5 1243 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 DHX40Q8IX18 779 aaKnown RBP4.21□□□□□ -1.74
SUB1-204ENST00000504016 NEXN-AS1Q8NBZ9 246 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 CLEC18CQ8NCF0 446 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 TMEM170AQ8WVE7 144 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 ERGIC1Q969X5 290 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 CYSLTR2Q9NS75 346 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 OR6C3Q9NZP0 311 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 PDP2Q9P2J9 529 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 SLC25A10Q9UBX3 287 aaPredicted RBP4.21□□□□□ -1.74
SUB1-204ENST00000504016 NAALADL1Q9UQQ1 740 aa4.21□□□□□ -1.74
SUB1-204ENST00000504016 GOLGA6L10A0A0M3HER8 536 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 A0A1B0GVM2 712 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 BCAT2O15382 392 aaPredicted RBP4.2□□□□□ -1.74
SUB1-204ENST00000504016 RPL3P39023 403 aaKnown RBP4.2□□□□□ -1.74
SUB1-204ENST00000504016 HARS2P49590 506 aaKnown RBP4.2□□□□□ -1.74
SUB1-204ENST00000504016 VAMP2P63027 116 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 NEXNQ0ZGT2 675 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 TRAF3Q13114 568 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 PLCB4Q15147 1175 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 ALFQ53S48 1182 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 HIST2H2BCQ6DN03 193 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 HIST2H2BDQ6DRA6 164 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 NCAPH2Q6IBW4 605 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 CREB3L2Q70SY1 520 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 CCDC105Q8IYK2 499 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 ZCCHC9Q8N567 271 aaKnown RBP4.2□□□□□ -1.74
SUB1-204ENST00000504016 ZMIZ2Q8NF64 920 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 ZCCHC10Q8TBK6 192 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 NOC3LQ8WTT2 800 aaKnown RBP4.2□□□□□ -1.74
SUB1-204ENST00000504016 TRIB2Q92519 343 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 SEC62Q99442 399 aaKnown RBP4.2□□□□□ -1.74
SUB1-204ENST00000504016 MXRA8Q9BRK3 442 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 ZNF556Q9HAH1 456 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 UBN1Q9NPG3 1134 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 ANKRD10Q9NXR5 420 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 IL36RNQ9UBH0 155 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 SLC13A4Q9UKG4 626 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 FAM96BQ9Y3D0 163 aa4.2□□□□□ -1.74
SUB1-204ENST00000504016 LSM4Q9Y4Z0 139 aaKnown RBP4.2□□□□□ -1.74
SUB1-204ENST00000504016 A0A1B0GUV1 79 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 DYTNA2CJ06 578 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 SMTNL1A8MU46 457 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 EBAG9O00559 213 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 SEC31AO94979 1220 aaKnown RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 ZBTB11O95625 1053 aaPredicted RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 FCGR1AP12314 374 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 PTPN2P17706 415 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 C21orf33P30042 268 aaPredicted RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 AMTP48728 403 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 CTCFP49711 727 aaPredicted RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 TRAF2Q12933 501 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 BAK1Q16611 211 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 TDRD12Q587J7 1177 aaKnown RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 OTUD3Q5T2D3 398 aaPredicted RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 ACAD10Q6JQN1 1059 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 H1FNTQ75WM6 255 aaPredicted RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 RRM2BQ7LG56 351 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 C16orf82Q7Z2V1 217 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 PATL1Q86TB9 770 aaKnown RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 PABPC5Q96DU9 382 aaKnown RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 TBATAQ96M53 351 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 ZNF570Q96NI8 536 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 AGXT2Q9BYV1 514 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 GLIS2Q9BZE0 524 aaPredicted RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 CISD1Q9NZ45 108 aaKnown RBP4.19□□□□□ -1.74
SUB1-204ENST00000504016 HCN3Q9P1Z3 774 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 CARD8Q9Y2G2 431 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 A3GALT2U3KPV4 340 aa4.19□□□□□ -1.74
SUB1-204ENST00000504016 IGHV4-28A0A0C4DH34 117 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 hDV102S1A0JD36 115 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 GAGE10A6NGK3 116 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 LDLRAD4O15165 306 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 KLK8O60259 260 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 SERPINI2O75830 405 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 DDNO94850 711 aaPredicted RBP4.18□□□□□ -1.74
SUB1-204ENST00000504016 VNN2O95498 520 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 PPP1R3DO95685 299 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 PCNAP12004 261 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 KRT10P13645 584 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 ITGAXP20702 1163 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 MYF6P23409 242 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 GNAQP50148 359 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 MXI1P50539 228 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms