RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 HNRNPLP14866 589 aaKnown RBP eCLIP15.08■□□□□ 0
SNF8-203ENST00000504000 TCN1P20061 433 aaPredicted RBP15.08■□□□□ 0
SNF8-203ENST00000504000 C1QTNF8P60827 252 aa15.08■□□□□ 0
SNF8-203ENST00000504000 NFKB2Q00653 900 aa15.08■□□□□ 0
SNF8-203ENST00000504000 TBC1D25Q3MII6 688 aa15.08■□□□□ 0
SNF8-203ENST00000504000 AGKQ53H12 422 aa15.08■□□□□ 0
SNF8-203ENST00000504000 NHSL2Q5HYW2 709 aa15.08■□□□□ 0
SNF8-203ENST00000504000 C6orf10Q5SRN2 563 aa15.08■□□□□ 0
SNF8-203ENST00000504000 INTS11Q5TA45 600 aaKnown RBP15.08■□□□□ 0
SNF8-203ENST00000504000 MANEALQ5VSG8 457 aa15.08■□□□□ 0
SNF8-203ENST00000504000 TRIML2Q8N7C3 387 aa15.08■□□□□ 0
SNF8-203ENST00000504000 MFSD2AQ8NA29 543 aa15.08■□□□□ 0
SNF8-203ENST00000504000 PCYOX1LQ8NBM8 494 aa15.08■□□□□ 0
SNF8-203ENST00000504000 FAM156AQ8NDB6 213 aa15.08■□□□□ 0
SNF8-203ENST00000504000 FATE1Q969F0 183 aa15.08■□□□□ 0
SNF8-203ENST00000504000 CELF6Q96J87 481 aaKnown RBP15.08■□□□□ 0
SNF8-203ENST00000504000 CYP2S1Q96SQ9 504 aa15.08■□□□□ 0
SNF8-203ENST00000504000 CCT7Q99832 543 aa15.08■□□□□ 0
SNF8-203ENST00000504000 HOPXQ9BPY8 73 aaPredicted RBP15.08■□□□□ 0
SNF8-203ENST00000504000 PCDHAC1Q9H158 963 aa15.08■□□□□ 0
SNF8-203ENST00000504000 UPF3AQ9H1J1 476 aaKnown RBP15.08■□□□□ 0
SNF8-203ENST00000504000 OLAHQ9NV23 265 aa15.08■□□□□ 0
SNF8-203ENST00000504000 MTF2Q9Y483 593 aaPredicted RBP15.08■□□□□ 0
SNF8-203ENST00000504000 MYBPHLA2RUH7 354 aa15.07■□□□□ 0
SNF8-203ENST00000504000 AQP12BA6NM10 295 aa15.07■□□□□ 0
SNF8-203ENST00000504000 H3BSA7 217 aa15.07■□□□□ 0
SNF8-203ENST00000504000 MRASO14807 208 aa15.07■□□□□ 0
SNF8-203ENST00000504000 WISP3O95389 354 aaPredicted RBP15.07■□□□□ 0
SNF8-203ENST00000504000 PCSK1P29120 753 aa15.07■□□□□ 0
SNF8-203ENST00000504000 DCTN2Q13561 401 aaKnown RBP15.07■□□□□ 0
SNF8-203ENST00000504000 KCTD21Q4G0X4 260 aa15.07■□□□□ 0
SNF8-203ENST00000504000 AFMIDQ63HM1 303 aa15.07■□□□□ 0
SNF8-203ENST00000504000 PRMT9Q6P2P2 845 aa15.07■□□□□ 0
SNF8-203ENST00000504000 DHRS4L2Q6PKH6 230 aa15.07■□□□□ 0
SNF8-203ENST00000504000 AMIGO2Q86SJ2 522 aa15.07■□□□□ 0
SNF8-203ENST00000504000 TAC4Q86UU9 113 aa15.07■□□□□ 0
SNF8-203ENST00000504000 DHFR2Q86XF0 187 aa15.07■□□□□ 0
SNF8-203ENST00000504000 AQP12AQ8IXF9 295 aa15.07■□□□□ 0
SNF8-203ENST00000504000 OR2T34Q8NGX1 318 aa15.07■□□□□ 0
SNF8-203ENST00000504000 OR2T3Q8NH03 318 aa15.07■□□□□ 0
SNF8-203ENST00000504000 DNAJB3Q8WWF6 145 aa15.07■□□□□ 0
SNF8-203ENST00000504000 TRPV6Q9H1D0 765 aa15.07■□□□□ 0
SNF8-203ENST00000504000 CLK4Q9HAZ1 481 aaKnown RBP15.07■□□□□ 0
SNF8-203ENST00000504000 ATP13A1Q9HD20 1204 aa15.07■□□□□ 0
SNF8-203ENST00000504000 VPS45Q9NRW7 570 aa15.07■□□□□ 0
SNF8-203ENST00000504000 CCM2LQ9NUG4 571 aaPredicted RBP15.07■□□□□ 0
SNF8-203ENST00000504000 TMEM30AQ9NV96 361 aa15.07■□□□□ 0
SNF8-203ENST00000504000 TRAF6Q9Y4K3 522 aa15.07■□□□□ 0
SNF8-203ENST00000504000 NUP205Q92621 2012 aa15.07■□□□□ 0
SNF8-203ENST00000504000 SHROOM3Q8TF72 1996 aa15.07■□□□□ 0
SNF8-203ENST00000504000 TRIM64A6NGJ6 449 aa15.06■□□□□ 0
SNF8-203ENST00000504000 TNPO2O14787 897 aaKnown RBP15.06■□□□□ 0
SNF8-203ENST00000504000 HTRA2O43464 458 aaPredicted RBP15.06■□□□□ 0
SNF8-203ENST00000504000 SRP72O76094 671 aaKnown RBP15.06■□□□□ 0
SNF8-203ENST00000504000 PGGT1BP53609 377 aa15.06■□□□□ 0
SNF8-203ENST00000504000 CSHL1Q14406 222 aa15.06■□□□□ 0
SNF8-203ENST00000504000 NRF1Q16656 503 aa15.06■□□□□ 0
SNF8-203ENST00000504000 ERMP1Q7Z2K6 904 aa15.06■□□□□ 0
SNF8-203ENST00000504000 DQX1Q8TE96 717 aaKnown RBP15.06■□□□□ 0
SNF8-203ENST00000504000 DIS3LQ8TF46 1054 aaKnown RBP15.06■□□□□ 0
SNF8-203ENST00000504000 GAB3Q8WWW8 586 aa15.06■□□□□ 0
SNF8-203ENST00000504000 TFAP2CQ92754 450 aa15.06■□□□□ 0
SNF8-203ENST00000504000 RMND5BQ96G75 393 aaPredicted RBP15.06■□□□□ 0
SNF8-203ENST00000504000 MRGPRX2Q96LB1 330 aa15.06■□□□□ 0
SNF8-203ENST00000504000 GPATCH1Q9BRR8 931 aaKnown RBP15.06■□□□□ 0
SNF8-203ENST00000504000 TMEM79Q9BSE2 394 aa15.06■□□□□ 0
SNF8-203ENST00000504000 TINF2Q9BSI4 451 aa15.06■□□□□ 0
SNF8-203ENST00000504000 FSD1LQ9BXM9 530 aa15.06■□□□□ 0
SNF8-203ENST00000504000 GSTO2Q9H4Y5 243 aa15.06■□□□□ 0
SNF8-203ENST00000504000 CHST12Q9NRB3 414 aa15.06■□□□□ 0
SNF8-203ENST00000504000 OSER1Q9NX31 292 aa15.06■□□□□ 0
SNF8-203ENST00000504000 CCDC167Q9P0B6 97 aa15.06■□□□□ 0
SNF8-203ENST00000504000 ABCD2Q9UBJ2 740 aa15.06■□□□□ 0
SNF8-203ENST00000504000 SLC2A6Q9UGQ3 507 aa15.06■□□□□ 0
SNF8-203ENST00000504000 SNX13Q9Y5W8 968 aa15.06■□□□□ 0
SNF8-203ENST00000504000 SNX10Q9Y5X0 201 aa15.06■□□□□ 0
SNF8-203ENST00000504000 DFFAO00273 331 aa15.06■□□□□ 0
SNF8-203ENST00000504000 HNRNPRO43390 633 aaKnown RBP15.06■□□□□ 0
SNF8-203ENST00000504000 TRPA1O75762 1119 aa15.06■□□□□ 0
SNF8-203ENST00000504000 FGF4P08620 206 aa15.06■□□□□ 0
SNF8-203ENST00000504000 YY1P25490 414 aa15.06■□□□□ 0
SNF8-203ENST00000504000 PCSK6P29122 969 aa15.06■□□□□ 0
SNF8-203ENST00000504000 USP46P62068 366 aa15.06■□□□□ 0
SNF8-203ENST00000504000 NRG1Q02297 640 aaPredicted RBP15.06■□□□□ 0
SNF8-203ENST00000504000 COQ5Q5HYK3 327 aa15.06■□□□□ 0
SNF8-203ENST00000504000 KRT80Q6KB66 452 aa15.06■□□□□ 0
SNF8-203ENST00000504000 HMBOX1Q6NT76 420 aa15.06■□□□□ 0
SNF8-203ENST00000504000 ZBTB49Q6ZSB9 765 aa15.06■□□□□ 0
SNF8-203ENST00000504000 DEFB132Q7Z7B7 95 aa15.06■□□□□ 0
SNF8-203ENST00000504000 SPATA6LQ8N4H0 392 aa15.06■□□□□ 0
SNF8-203ENST00000504000 USP33Q8TEY7 942 aa15.06■□□□□ 0
SNF8-203ENST00000504000 EDEM1Q92611 657 aa15.06■□□□□ 0
SNF8-203ENST00000504000 CDCA5Q96FF9 252 aa15.06■□□□□ 0
SNF8-203ENST00000504000 ZNF419Q96HQ0 510 aaPredicted RBP15.06■□□□□ 0
SNF8-203ENST00000504000 TCF12Q99081 682 aa15.06■□□□□ 0
SNF8-203ENST00000504000 TRIM15Q9C019 465 aa15.06■□□□□ 0
SNF8-203ENST00000504000 DDX18Q9NVP1 670 aaKnown RBP15.06■□□□□ 0
SNF8-203ENST00000504000 DUS2Q9NX74 493 aaKnown RBP15.06■□□□□ 0
SNF8-203ENST00000504000 GALNT8Q9NY28 637 aa15.06■□□□□ 0
SNF8-203ENST00000504000 CCDC78A2IDD5 438 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms