RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SLC39A7Q92504 469 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 HSPH1Q92598 858 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 GLMNQ92990 594 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 PDFQ9HBH1 243 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 PCDH12Q9NPG4 1184 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 MBNL1Q9NR56 388 aaKnown RBP12.06□□□□□ -0.48
MED28-203ENST00000503945 IP6K2Q9UHH9 426 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 KLF15Q9UIH9 416 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 SALL4Q9UJQ4 1053 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 PTPRQQ9UMZ3 2332 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 CFAP69A5D8W1 941 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 ATXN7O15265 892 aaPredicted RBP12.05□□□□□ -0.48
MED28-203ENST00000503945 GP1BAP07359 652 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 GIMD1P0DJR0 217 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 CTSEP14091 401 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 AMPD1P23109 780 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 SSR1P43307 286 aaKnown RBP12.05□□□□□ -0.48
MED28-203ENST00000503945 RPIAP49247 311 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 LIG3P49916 1009 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 ADKP55263 362 aaKnown RBP12.05□□□□□ -0.48
MED28-203ENST00000503945 INSM1Q01101 510 aaPredicted RBP12.05□□□□□ -0.48
MED28-203ENST00000503945 PPARDQ03181 441 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 EIF2B5Q13144 721 aaKnown RBP12.05□□□□□ -0.48
MED28-203ENST00000503945 INPP5AQ14642 412 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 PRRT3Q5FWE3 981 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 CCDC122Q5T0U0 273 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 HGSNATQ68CP4 663 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 ZCCHC8Q6NZY4 707 aaKnown RBP12.05□□□□□ -0.48
MED28-203ENST00000503945 TMCO3Q6UWJ1 677 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 POLNQ7Z5Q5 900 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 BBS5Q8N3I7 341 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 ZNF548Q8NEK5 533 aaPredicted RBP12.05□□□□□ -0.48
MED28-203ENST00000503945 NSMCE1Q8WV22 266 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 ZNF599Q96NL3 588 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 SEPT3Q9UH03 358 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.05□□□□□ -0.48
MED28-203ENST00000503945 DOCK4Q8N1I0 1966 aa12.05□□□□□ -0.48
MED28-203ENST00000503945 HELZ2Q9BYK8 2649 aaKnown RBP12.05□□□□□ -0.48
MED28-203ENST00000503945 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.04□□□□□ -0.48
MED28-203ENST00000503945 TSPAN11A1L157 253 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 CPED1A4D0V7 1026 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 TK2O00142 265 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 RRP8O43159 456 aaKnown RBP12.04□□□□□ -0.48
MED28-203ENST00000503945 OPA1O60313 960 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 ANXA6P08133 673 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 RARAP10276 462 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 MYF5P13349 255 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 NFKBIAP25963 317 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 IL1R2P27930 398 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 PBX1P40424 430 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 DPYSQ14117 519 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 LBRQ14739 615 aaKnown RBP12.04□□□□□ -0.48
MED28-203ENST00000503945 DPYSL2Q16555 572 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 HADHQ16836 314 aaKnown RBP12.04□□□□□ -0.48
MED28-203ENST00000503945 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
MED28-203ENST00000503945 SMTNL2Q2TAL5 461 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 WSCD2Q2TBF2 565 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 SKOR2Q2VWA4 1001 aaPredicted RBP12.04□□□□□ -0.48
MED28-203ENST00000503945 ALKBH5Q6P6C2 394 aaKnown RBP12.04□□□□□ -0.48
MED28-203ENST00000503945 KDM7AQ6ZMT4 941 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 ARHGAP36Q6ZRI8 547 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 RD3Q7Z3Z2 195 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 ARHGAP12Q8IWW6 846 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 DCBLD1Q8N8Z6 715 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 TP53I13Q8NBR0 393 aaPredicted RBP12.04□□□□□ -0.48
MED28-203ENST00000503945 ATL2Q8NHH9 583 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 TPCN2Q8NHX9 752 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 FGF11Q92914 225 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 PSKH2Q96QS6 385 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 NUP85Q9BW27 656 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 THAP2Q9H0W7 228 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 IFNKQ9P0W0 207 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 DOLKQ9UPQ8 538 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 ATP8A1Q9Y2Q0 1164 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 COQ6Q9Y2Z9 468 aa12.04□□□□□ -0.48
MED28-203ENST00000503945 A0A087X0T9 212 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 A0A1W2PQ67 120 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 LMO7DNF2Z398 122 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 YY2O15391 372 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 BRINP1O60477 761 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 GCATO75600 419 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 CYP1A2P05177 515 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 FAM228BP0C875 321 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 C6P13671 934 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 HSPA9P38646 679 aaKnown RBP12.03□□□□□ -0.48
MED28-203ENST00000503945 RGRP47804 291 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 AP1S1P61966 158 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 SLC10A7Q0GE19 358 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 C1orf61Q13536 156 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 KRT81Q14533 505 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 AGERQ15109 404 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 ELOCQ15369 112 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 NR0B2Q15466 257 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 CDKN3Q16667 212 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 DEFB133Q30KQ1 61 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 TPRG1LQ5T0D9 272 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 ESRP1Q6NXG1 681 aaKnown RBP12.03□□□□□ -0.48
MED28-203ENST00000503945 LVRNQ6Q4G3 990 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 ENPP7Q6UWV6 458 aa12.03□□□□□ -0.48
MED28-203ENST00000503945 MACC1Q6ZN28 852 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms