RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 C2orf71A6NGG8 1288 aa21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 CCL22O00626 93 aa21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 TMCC1O94876 653 aa21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 SERPINB3P29508 390 aa21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 ERVFC1P60507 584 aa21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 INO80DQ53TQ3 878 aaPredicted RBP21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 RBM20Q5T481 1227 aaKnown RBP21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 GPATCH11Q8N954 259 aa21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 PIWIL2Q8TC59 973 aaKnown RBP21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 WFDC5Q8TCV5 224 aa21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 BADQ92934 168 aa21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 DNAJC1Q96KC8 554 aaKnown RBP21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 SAR1AQ9NR31 198 aa21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 LSM7Q9UK45 103 aaKnown RBP21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 RUVBL2Q9Y230 463 aaKnown RBP21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 LAMA2P24043 3122 aaKnown RBP21.46■■□□□ 1.03
UBE2D3-216ENST00000503742 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 TARM1B6A8C7 271 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 S1PR4O95977 384 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 CKMP06732 381 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 CDC25CP30307 473 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 ABCE1P61221 599 aaKnown RBP21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 FPGSQ05932 587 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 TMEM240Q5SV17 173 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 LINGO4Q6UY18 593 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 UBE2Q1Q7Z7E8 422 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 CPXM2Q8N436 756 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 GPR150Q8NGU9 434 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 STYXQ8WUJ0 223 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 KLHL29Q96CT2 875 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 TSNARE1Q96NA8 513 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 TCF25Q9BQ70 676 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 SIKE1Q9BRV8 207 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 ARHGEF3Q9NR81 526 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 OXSMQ9NWU1 459 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 MARCH4Q9P2E8 410 aaPredicted RBP21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 LHX3Q9UBR4 397 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 MARCOQ9UEW3 520 aaPredicted RBP21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 DNAJC16Q9Y2G8 782 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 ZNF510Q9Y2H8 683 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 ANKRD36A6QL64 1941 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 MTCL1Q9Y4B5 1905 aaKnown RBP21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 A0A087X1B8 175 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 OR51F1A6NGY5 319 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 RPP40O75818 363 aaKnown RBP21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 KLHL2O95198 593 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 PIRTP0C851 137 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 KITP10721 976 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 DLG1Q12959 904 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 ZYG11AQ6WRX3 759 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 RNF135Q8IUD6 432 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 RAD9AQ99638 391 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 LZTS1Q9Y250 596 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 SPO11Q9Y5K1 396 aa21.45■■□□□ 1.02
UBE2D3-216ENST00000503742 TK2O00142 265 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 TRIM13O60858 407 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 NQO1P15559 274 aaKnown RBP21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 PFKLP17858 780 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 PSMA3P25788 255 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 TARSP26639 723 aaKnown RBP21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 CSKP41240 450 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 LBX1P52954 281 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 AQP5P55064 265 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 PTPRCAPQ14761 206 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 FAM91A1Q658Y4 838 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 NAPRTQ6XQN6 538 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 ELMOD1Q8N336 334 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 FSTL5Q8N475 847 aaPredicted RBP21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 OR13C4Q8NGS5 318 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 OLFM1Q99784 485 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 EMILIN2Q9BXX0 1053 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 SUDS3Q9H7L9 328 aaPredicted RBP21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 CFAP97Q9P2B7 532 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 CPSF2Q9P2I0 782 aaKnown RBP21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 VPS51Q9UID3 782 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 VPS28Q9UK41 221 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 TRIM33Q9UPN9 1127 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 RAI2Q9Y5P3 530 aa21.44■■□□□ 1.02
UBE2D3-216ENST00000503742 ALPK3Q96L96 1907 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 TRAV19A0A0A6YYK7 116 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 A0A1W2PRU2 124 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 CCDC162PA2VCL2 907 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 LCHNA4D1U4 455 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 BUD23O43709 281 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 H2AFYO75367 372 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 GOT2P00505 430 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 PDHA1P08559 390 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 ZNF140P52738 457 aaPredicted RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 KCNJ2P63252 427 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 CDH18Q13634 790 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 TSNAXIP1Q2TAA8 658 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 LRRC8EQ6NSJ5 796 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 NCEH1Q6PIU2 408 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 TBC1D1Q86TI0 1168 aaPredicted RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 SUGP1Q8IWZ8 645 aaKnown RBP21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 PNPLA1Q8N8W4 532 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 DCAF4L2Q8NA75 395 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 NXNL1Q96CM4 212 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 NDNQ99608 321 aa21.43■■□□□ 1.02
UBE2D3-216ENST00000503742 WWP1Q9H0M0 922 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms