RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TCF3P15923 654 aa22.12■■□□□ 1.13
PTPN13-205ENST00000502971 AP1S1P61966 158 aa22.12■■□□□ 1.13
PTPN13-205ENST00000502971 USP10Q14694 798 aaKnown RBP22.12■■□□□ 1.13
PTPN13-205ENST00000502971 CCDC63Q8NA47 563 aa22.12■■□□□ 1.13
PTPN13-205ENST00000502971 HDAC10Q969S8 669 aa22.12■■□□□ 1.13
PTPN13-205ENST00000502971 E2F7Q96AV8 911 aa22.12■■□□□ 1.13
PTPN13-205ENST00000502971 KLHL14Q9P2G3 628 aa22.12■■□□□ 1.13
PTPN13-205ENST00000502971 TBC1D14Q9P2M4 693 aa22.12■■□□□ 1.13
PTPN13-205ENST00000502971 TLK1Q9UKI8 766 aa22.12■■□□□ 1.13
PTPN13-205ENST00000502971 FCF1Q9Y324 198 aaKnown RBP22.12■■□□□ 1.13
PTPN13-205ENST00000502971 HCFC2Q9Y5Z7 792 aa22.12■■□□□ 1.13
PTPN13-205ENST00000502971 ARL5AQ9Y689 179 aa22.12■■□□□ 1.13
PTPN13-205ENST00000502971 CCDC195A0A1B0GUA6 201 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 FAM95CA0A1B0GW59 222 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 CCT8L1PA6NM43 557 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 PER2O15055 1255 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 RPP40O75818 363 aaKnown RBP22.11■■□□□ 1.13
PTPN13-205ENST00000502971 PROCP04070 461 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 SF3A3Q12874 501 aaKnown RBP eCLIP22.11■■□□□ 1.13
PTPN13-205ENST00000502971 TAF1AQ15573 450 aaPredicted RBP22.11■■□□□ 1.13
PTPN13-205ENST00000502971 PLEKHG6Q3KR16 790 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 C16orf46Q6P387 395 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 CCDC121Q6ZUS5 278 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 GRASPQ7Z6J2 395 aaPredicted RBP22.11■■□□□ 1.13
PTPN13-205ENST00000502971 SRLQ86TD4 932 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 ZNF557Q8N988 423 aaPredicted RBP22.11■■□□□ 1.13
PTPN13-205ENST00000502971 ACVR1CQ8NER5 493 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 OR6P1Q8NGX9 317 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 LMLNQ96KR4 655 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 LMAN2LQ9H0V9 348 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 NKX2-4Q9H2Z4 354 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 ABCB8Q9NUT2 735 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 CLEC4EQ9ULY5 219 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 KCTD3Q9Y597 815 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 PCDHGC4Q9Y5F7 938 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 CD70P32970 193 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 CSNK1DP48730 415 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 ARSDP51689 593 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 NTHL1P78549 312 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 TRAF2Q12933 501 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 ZNF77Q15935 545 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 TAF1BQ53T94 588 aaPredicted RBP22.11■■□□□ 1.13
PTPN13-205ENST00000502971 CILP2Q8IUL8 1156 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 LPCAT1Q8NF37 534 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 GPR150Q8NGU9 434 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 ZNF707Q96C28 371 aaPredicted RBP22.11■■□□□ 1.13
PTPN13-205ENST00000502971 DNAJC1Q96KC8 554 aaKnown RBP22.11■■□□□ 1.13
PTPN13-205ENST00000502971 MECRQ9BV79 373 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 TMEM216Q9P0N5 145 aa22.11■■□□□ 1.13
PTPN13-205ENST00000502971 RRP15Q9Y3B9 282 aaKnown RBP22.11■■□□□ 1.13
PTPN13-205ENST00000502971 LAMA3Q16787 3333 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 A0A1W2PPC1 479 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 ANKRD66B4E2M5 251 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 HAUS5O94927 633 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 TGDSO95455 350 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 GSRP00390 522 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 MT-CO1P00395 513 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 PENKP01210 267 aaPredicted RBP22.1■■□□□ 1.13
PTPN13-205ENST00000502971 PRKCGP05129 697 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 TROVE2P10155 538 aaKnown RBP eCLIP22.1■■□□□ 1.13
PTPN13-205ENST00000502971 COL6A2P12110 1019 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 PSMA3P25788 255 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 CRABP2P29373 138 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 MAPK8P45983 427 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 CLCN5P51795 746 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 POU4F1Q01851 419 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 USP4Q13107 963 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 DLG2Q15700 870 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 FASTKD1Q53R41 847 aaKnown RBP22.1■■□□□ 1.13
PTPN13-205ENST00000502971 RNF187Q5TA31 235 aaPredicted RBP22.1■■□□□ 1.13
PTPN13-205ENST00000502971 RAPH1Q70E73 1250 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 PTAR1Q7Z6K3 402 aaPredicted RBP22.1■■□□□ 1.13
PTPN13-205ENST00000502971 OTUD6BQ8N6M0 293 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 RIN3Q8TB24 985 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 TBATAQ96M53 351 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 KDM4CQ9H3R0 1056 aa22.1■■□□□ 1.13
PTPN13-205ENST00000502971 NLE1Q9NVX2 485 aaPredicted RBP22.1■■□□□ 1.13
PTPN13-205ENST00000502971 C2orf81A6NN90 581 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 PDHA1P08559 390 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 STMN1P16949 149 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 ZNF140P52738 457 aaPredicted RBP22.09■■□□□ 1.13
PTPN13-205ENST00000502971 RAB10P61026 200 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 TMPRSS15P98073 1019 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 CHI3L2Q15782 390 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 ZNF697Q5TEC3 545 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 CHRDL2Q6WN34 429 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 TRPM8Q7Z2W7 1104 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 GLT6D1Q7Z4J2 308 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 SLC41A1Q8IVJ1 513 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 ZNF398Q8TD17 642 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 CCT6BQ92526 530 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 OTUB2Q96DC9 234 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 TSNARE1Q96NA8 513 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 FBXO6Q9NRD1 293 aaPredicted RBP22.09■■□□□ 1.13
PTPN13-205ENST00000502971 SPO11Q9Y5K1 396 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 NOTCH4Q99466 2003 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.09■■□□□ 1.13
PTPN13-205ENST00000502971 K7ERQ8 282 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 FZD6O60353 706 aa22.09■■□□□ 1.13
PTPN13-205ENST00000502971 PRAMEF12O95522 483 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms