RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 SEPT8Q92599 483 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 PSMG2Q969U7 264 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 NXNL1Q96CM4 212 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 SEPT5Q99719 369 aaPredicted RBP12.06□□□□□ -0.48
NUP54-202ENST00000502850 OMDQ99983 421 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 C11orf49Q9H6J7 331 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 POPDC3Q9HBV1 291 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 SLC2A6Q9UGQ3 507 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 CDH22Q9UJ99 828 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 SSX2IPQ9Y2D8 614 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 J3KR12 359 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 CHRNGP07510 517 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 ITGAXP20702 1163 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 OGNP20774 298 aaKnown RBP12.05□□□□□ -0.48
NUP54-202ENST00000502850 TACR2P21452 398 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 OR1E1P30953 314 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 GMPRP36959 345 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 SLC25A3Q00325 362 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 PFKPQ01813 784 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 KLC1Q07866 573 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 BLMHQ13867 455 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 MAPRE2Q15555 327 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 C5orf22Q49AR2 442 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 ALFQ53S48 1182 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 ALG1LQ6GMV1 187 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 PGM2L1Q6PCE3 622 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 ATG14Q6ZNE5 492 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 FBXW8Q8N3Y1 598 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 POU5F2Q8N7G0 328 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 ATAD1Q8NBU5 361 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 HEXDCQ8WVB3 486 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 ASB2Q96Q27 587 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 ZNF184Q99676 751 aaPredicted RBP12.05□□□□□ -0.48
NUP54-202ENST00000502850 TTLL2Q9BWV7 592 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 MAGEH1Q9H213 219 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 POMKQ9H5K3 350 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 HACD3Q9P035 362 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 UXTQ9UBK9 157 aaPredicted RBP12.05□□□□□ -0.48
NUP54-202ENST00000502850 ANKRD36A6QL64 1941 aa12.05□□□□□ -0.48
NUP54-202ENST00000502850 GRID2O43424 1007 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 TLR5O60602 858 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 CNTN5O94779 1100 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 MMP2P08253 660 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 SERPINF2P08697 491 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 CES1P23141 567 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 PIK3R1P27986 724 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 SLC11A2P49281 568 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 XIAPP98170 497 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 DSC2Q02487 901 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 TBL3Q12788 808 aaKnown RBP12.04□□□□□ -0.48
NUP54-202ENST00000502850 CYLC2Q14093 348 aaPredicted RBP12.04□□□□□ -0.48
NUP54-202ENST00000502850 RFTN1Q14699 578 aaPredicted RBP12.04□□□□□ -0.48
NUP54-202ENST00000502850 GSTA3Q16772 222 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 SIRPB2Q5JXA9 342 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 HECTD2Q5U5R9 776 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 TRIM68Q6AZZ1 485 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 TRIM67Q6ZTA4 783 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 NPAS4Q8IUM7 802 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 DEFB107AQ8IZN7 70 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 CCNYL1Q8N7R7 359 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 KYQ8NBH2 561 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 OR13J1Q8NGT2 312 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 GPR150Q8NGU9 434 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 OR6P1Q8NGX9 317 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 ARRDC2Q8TBH0 407 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 DTX3LQ8TDB6 740 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 IGSF8Q969P0 613 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 KLHL5Q96PQ7 755 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 OR52B2Q96RD2 323 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 ATXN3LQ9H3M9 355 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 S100A14Q9HCY8 104 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 MRPL40Q9NQ50 206 aaKnown RBP12.04□□□□□ -0.48
NUP54-202ENST00000502850 IGSF5Q9NSI5 407 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 SEPT3Q9UH03 358 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 DNMT3LQ9UJW3 386 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 VPS28Q9UK41 221 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 PHF24Q9UPV7 400 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 VWA7Q9Y334 891 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 CHD5Q8TDI0 1954 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 TRIOBPQ9H2D6 2365 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 ZBTB14O43829 449 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 TBC1D4O60343 1298 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 IPO13O94829 963 aaKnown RBP12.04□□□□□ -0.48
NUP54-202ENST00000502850 GLP2RO95838 553 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 F7P08709 466 aaPredicted RBP12.04□□□□□ -0.48
NUP54-202ENST00000502850 ATXN1LP0C7T5 689 aaKnown RBP12.04□□□□□ -0.48
NUP54-202ENST00000502850 ETFBP38117 255 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 TUFMP49411 452 aaKnown RBP12.04□□□□□ -0.48
NUP54-202ENST00000502850 MTTPP55157 894 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 CDH4P55283 916 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 ARPP19P56211 112 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 MAXP61244 160 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 NAA20P61599 178 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 NFKB2Q00653 900 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 DSG1Q02413 1049 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 NSUN2Q08J23 767 aaKnown RBP eCLIP12.04□□□□□ -0.48
NUP54-202ENST00000502850 CSHL1Q14406 222 aa12.04□□□□□ -0.48
NUP54-202ENST00000502850 LSM12Q3MHD2 195 aaKnown RBP12.04□□□□□ -0.48
NUP54-202ENST00000502850 KLHDC10Q6PID8 442 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms