RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 LINC01465Q8N7H1 131 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 KIAA1958Q8N8K9 716 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ARNTL2Q8WYA1 636 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 LZICQ8WZA0 190 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 STMN2Q93045 179 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 PPP1R14BQ96C90 147 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 DGCR14Q96DF8 476 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 FAM46AQ96IP4 442 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 QKIQ96PU8 341 aaKnown RBP eCLIP3.98□□□□□ -1.77
CLTC-209ENST00000498711 TAAR9Q96RI9 348 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 CENPKQ9BS16 269 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 TRIM4Q9C037 500 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 INO80BQ9C086 356 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 TMEM39BQ9GZU3 492 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 VCX3BQ9H321 246 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 PCDH18Q9HCL0 1135 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 VCX3AQ9NNX9 186 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ZNF302Q9NR11 478 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 NDE1Q9NXR1 346 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 C6orf203Q9P0P8 240 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 PPARGC1AQ9UBK2 798 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 PRPF19Q9UMS4 504 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 FGF10O15520 208 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 ITM2AO43736 263 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 UGT1A9O60656 530 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 GLRA3O75311 464 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 LEFTY1O75610 366 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ZNF189O75820 626 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 ALX3O95076 343 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 TFAP2AP05549 437 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ENO1P06733 434 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 SETSIPP0DME0 302 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 MYCLP12524 364 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 PTPN9P43378 593 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 PSMC1P62191 440 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 IRX4P78413 519 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 IRF9Q00978 393 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 DPYSL2Q16555 572 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 FASTKD1Q53R41 847 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 LCE2AQ5TA79 106 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 CYP4A22Q5TCH4 519 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 C6orf163Q5TEZ5 329 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 DARS2Q6PI48 645 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 DHRS4L2Q6PKH6 230 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 NPNTQ6UXI9 565 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 LIMS2Q7Z4I7 341 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ZC3H18Q86VM9 953 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 MFSD4AQ8N468 514 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 TMEM151AQ8N4L1 468 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 TTC39CQ8N584 583 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ZNF610Q8N9Z0 462 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 KCTD6Q8NC69 237 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 DEPTORQ8TB45 409 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 SPATA18Q8TC71 538 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ABHD8Q96I13 439 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ACAP3Q96P50 834 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 GBP5Q96PP8 586 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 UHRF1Q96T88 793 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 ELF4Q99607 663 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 KCNJ15Q99712 375 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 EBF4Q9BQW3 602 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ZDHHC5Q9C0B5 715 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 UGT1A7Q9HAW7 530 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 UGT1A10Q9HAW8 530 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 UGT1A8Q9HAW9 530 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 SMURF1Q9HCE7 757 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 XAB2Q9HCS7 855 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 RNF146Q9NTX7 359 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 PTTG2Q9NZH5 202 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ARMCX1Q9P291 453 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 CPSF2Q9P2I0 782 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 MORF4L1Q9UBU8 362 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ZC3H7BQ9UGR2 993 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 CDH22Q9UJ99 828 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 SARDHQ9UL12 918 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 PSMD13Q9UNM6 376 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 TNFSF13BQ9Y275 285 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 NR2E3Q9Y5X4 410 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 MAD1L1Q9Y6D9 718 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 PRSS51A0A1B0GVH4 220 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 TRIM64BA6NI03 449 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ACKR2O00590 384 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 CYB561D2O14569 222 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 HGSO14964 777 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 KDM1AO60341 852 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 METTL18O95568 372 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 IFNB1P01574 187 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 SRFP11831 508 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ZFXP17010 805 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 RBL1P28749 1068 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 FDFT1P37268 417 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 PEX19P40855 299 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 ALDH3B2P48448 385 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 SLC1A6P48664 564 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 CHN2P52757 468 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 PRKAA2P54646 552 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 PCBP3P57721 371 aaKnown RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 ZBTB16Q05516 673 aa3.98□□□□□ -1.77
CLTC-209ENST00000498711 SLC10A2Q12908 348 aaPredicted RBP3.98□□□□□ -1.77
CLTC-209ENST00000498711 STILQ15468 1287 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms