RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 TNFP01375 233 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 NUDT7P0C024 238 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 KLK7P49862 253 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 ZNF143P52747 638 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-211ENST00000498534 GSCP56915 257 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-211ENST00000498534 PTP4A2Q12974 167 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 INPP5AQ14642 412 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 IRF4Q15306 451 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 CYTH1Q15438 398 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 UGP2Q16851 508 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 CLEC16AQ2KHT3 1053 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 WSCD2Q2TBF2 565 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 DNAJC24Q6P3W2 148 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 DCUN1D2Q6PH85 259 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 PCSK4Q6UW60 755 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 DNAAF5Q86Y56 855 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 UMODL1-AS1Q8N2C9 162 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 PAF1Q8N7H5 531 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 ARL10Q8N8L6 244 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 NETO2Q8NC67 525 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 NEK11Q8NG66 645 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 SNRNP27Q8WVK2 155 aaKnown RBP12.14□□□□□ -0.47
CNOT4-211ENST00000498534 PRR11Q96HE9 360 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-211ENST00000498534 GFM1Q96RP9 751 aaKnown RBP12.14□□□□□ -0.47
CNOT4-211ENST00000498534 PCDHB18PQ96TA0 734 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 CNPY3Q9BT09 278 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 APOOQ9BUR5 198 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 KLC2Q9H0B6 622 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 WDR70Q9NW82 654 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 SIRPGQ9P1W8 387 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 UBA2Q9UBT2 640 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-211ENST00000498534 GPR34Q9UPC5 381 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 NEU3Q9UQ49 428 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 WASH4PA8MWX3 477 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 J3QKU1 62 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 K7ENP7 123 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 INSIG1O15503 277 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 ITGA2BP08514 1039 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 CCDC172P0C7W6 258 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 HTR7P34969 479 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 LIG3P49916 1009 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 NDST2P52849 883 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 SRP54P61011 504 aaKnown RBP12.13□□□□□ -0.47
CNOT4-211ENST00000498534 POLR2LP62875 67 aaKnown RBP12.13□□□□□ -0.47
CNOT4-211ENST00000498534 SKOR1P84550 965 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 EIF3IQ13347 325 aaKnown RBP12.13□□□□□ -0.47
CNOT4-211ENST00000498534 NFATC4Q14934 902 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 ALG11Q2TAA5 492 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 CDKAL1Q5VV42 579 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 INO80CQ6PI98 192 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-211ENST00000498534 BRAT1Q6PJG6 821 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 RAB11FIP2Q7L804 512 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 CLEC14AQ86T13 490 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 FBXO39Q8N4B4 442 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 LIN37Q96GY3 246 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-211ENST00000498534 EXOC2Q96KP1 924 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 TUBGCP5Q96RT8 1024 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 KRTAP3-3Q9BYR6 98 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 KRTAP3-2Q9BYR7 98 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 EPB41L5Q9HCM4 733 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 PCDH12Q9NPG4 1184 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 LHX3Q9UBR4 397 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 KLQ9UEF7 1012 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 PNMA8BQ9ULN7 279 aaPredicted RBP12.13□□□□□ -0.47
CNOT4-211ENST00000498534 FZD10Q9ULW2 581 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 COQ6Q9Y2Z9 468 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 PIEZO2Q9H5I5 2752 aa12.13□□□□□ -0.47
CNOT4-211ENST00000498534 CFAP69A5D8W1 941 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 ARHGAP42A6NI28 874 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 NTN3O00634 580 aaPredicted RBP12.12□□□□□ -0.47
CNOT4-211ENST00000498534 PLD2O14939 933 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 EPHB6O15197 1021 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 DAPK3O43293 454 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 CCP110O43303 1012 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 PIGNO95427 931 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 CELA2BP08218 269 aaPredicted RBP12.12□□□□□ -0.47
CNOT4-211ENST00000498534 C6P13671 934 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 KELP23276 732 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 SERPINA4P29622 427 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 INHBCP55103 352 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 TPI1P60174 286 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 CCL7P80098 99 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 LY6DQ14210 128 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 AGERQ15109 404 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 TCEA2Q15560 299 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 KIF26BQ2KJY2 2108 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 ZSCAN23Q3MJ62 389 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 JAMLQ86YT9 394 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 PCDH19Q8TAB3 1148 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 CCDC74AQ96AQ1 378 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 WDR92Q96MX6 357 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 TMEM74Q96NL1 305 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 MCEEQ96PE7 176 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 CCNL2Q96S94 520 aaPredicted RBP12.12□□□□□ -0.47
CNOT4-211ENST00000498534 AGPAT1Q99943 283 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 ATP13A3Q9H7F0 1226 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 FANCLQ9NW38 375 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 SIK3Q9Y2K2 1263 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 OR1A2Q9Y585 309 aa12.12□□□□□ -0.47
CNOT4-211ENST00000498534 COL6A6A6NMZ7 2263 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms