RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 CPEB1Q9BZB8 566 aaKnown RBP22.79■■□□□ 1.24
CDKN2A-208ENST00000498124 IPO11Q9UI26 975 aaKnown RBP22.79■■□□□ 1.24
CDKN2A-208ENST00000498124 GCN1Q92616 2671 aaKnown RBP22.79■■□□□ 1.24
CDKN2A-208ENST00000498124 J3KR12 359 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 GCATO75600 419 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 NDUFA10O95299 355 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 MAGEA1P43355 309 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 RAD51Q06609 339 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 TBC1D25Q3MII6 688 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 GUSBP11Q6P575 273 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 LMX1AQ8TE12 382 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 CXorf40AQ8TE69 158 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 NCAPGQ9BPX3 1015 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 WRAP53Q9BUR4 548 aaKnown RBP22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 LRRC61Q9BV99 259 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 CTTNBP2NLQ9P2B4 639 aa22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 UBA2Q9UBT2 640 aaPredicted RBP22.78■■□□□ 1.24
CDKN2A-208ENST00000498124 LRP4O75096 1905 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 TM7SF2O76062 418 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 HTR7P34969 479 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 DUSP3P51452 185 aaPredicted RBP22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 TPI1P60174 286 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 ACAP1Q15027 740 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 IRF4Q15306 451 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 CDKN3Q16667 212 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 TMEM52BQ4KMG9 183 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 MACC1Q6ZN28 852 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 CYP4V2Q6ZWL3 525 aaPredicted RBP22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 ZSWIM9Q86XI8 627 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 PHACTR4Q8IZ21 702 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 ZNF564Q8TBZ8 553 aaPredicted RBP22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 FGF11Q92914 225 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 CELF6Q96J87 481 aaKnown RBP22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 BOCQ9BWV1 1114 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 PRORYQ9H606 182 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 APOBEC3BQ9UH17 382 aaKnown RBP22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 IP6K2Q9UHH9 426 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 SALL4Q9UJQ4 1053 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 AP4E1Q9UPM8 1137 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 RAI2Q9Y5P3 530 aa22.77■■□□□ 1.24
CDKN2A-208ENST00000498124 ATMQ13315 3056 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 CFAP46Q8IYW2 2715 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 TPP1O14773 563 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 PRAMEF11O60813 436 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 CSO75390 466 aaKnown RBP22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 RNF8O76064 485 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 TGM2P21980 687 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 RGRP47804 291 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 YPEL5P62699 121 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 RAD9BQ6WBX8 426 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 TMEM139Q8IV31 216 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 CCDC112Q8NEF3 446 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 MAPK15Q8TD08 544 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 TBATAQ96M53 351 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 DEPDC7Q96QD5 511 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 TRIM7Q9C029 511 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 CLPBQ9H078 707 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 SPASTQ9UBP0 616 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 LCMT1Q9UIC8 334 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 ANAPC7Q9UJX3 599 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 COQ6Q9Y2Z9 468 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 PCDHA13Q9Y5I0 950 aa22.76■■□□□ 1.23
CDKN2A-208ENST00000498124 A0A1W2PNU3 283 aaPredicted RBP22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 MYO1FO00160 1098 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 CASC3O15234 703 aaKnown RBP22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 BUB1BO60566 1050 aaPredicted RBP22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 MPOP05164 745 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 CELA2BP08218 269 aaPredicted RBP22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 ACTN2P35609 894 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 NDST2P52849 883 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 THOP1P52888 689 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 C1orf61Q13536 156 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 PTK2BQ14289 1009 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 PIGHQ14442 188 aaPredicted RBP22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 PRRT3Q5FWE3 981 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 AFMIDQ63HM1 303 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 NYAP1Q6ZVC0 841 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 EFL1Q7Z2Z2 1120 aaKnown RBP22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 ARHGAP12Q8IWW6 846 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 RHOT2Q8IXI1 618 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 SLC35F3Q8IY50 421 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 HCAR2Q8TDS4 363 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 BTN2A2Q8WVV5 523 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 KCTD15Q96SI1 283 aaPredicted RBP22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 SNRNP25Q9BV90 132 aaKnown RBP22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 SLC39A8Q9C0K1 460 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 PCDH12Q9NPG4 1184 aa22.75■■□□□ 1.23
CDKN2A-208ENST00000498124 RP1P56715 2156 aa22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 EME2A4GXA9 379 aaPredicted RBP22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 LMO7DNF2Z398 122 aa22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 RRP8O43159 456 aaKnown RBP22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 NRDCO43847 1150 aa22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 DXOO77932 396 aaKnown RBP22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 C6P13671 934 aa22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 PAPOLAP51003 745 aaKnown RBP22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 SUOXP51687 545 aa22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 UGP2Q16851 508 aa22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 WSCD2Q2TBF2 565 aa22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 PERM1Q5SV97 790 aa22.74■■□□□ 1.23
CDKN2A-208ENST00000498124 LRRC69Q6ZNQ3 347 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms