RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 FAM221BA6H8Z2 402 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 C1QTNF9BB2RNN3 333 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 ENC1O14682 589 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 PROS1P07225 676 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 KRT7P08729 469 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 C1QTNF9P0C862 333 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 TNNT1P13805 278 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 ITIH2P19823 946 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 COMTP21964 271 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 SCNN1BP51168 640 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 TAS2R40P59535 323 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 AP1S1P61966 158 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 PDK2Q15119 407 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 TMEM52BQ4KMG9 183 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 LRRC49Q8IUZ0 686 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 MAP7D3Q8IWC1 876 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 SLC22A18ASQ8N1D0 253 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 TSC1Q92574 1164 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 WRAP53Q9BUR4 548 aaKnown RBP15.46■□□□□ 0.07
NUP50-219ENST00000497960 PCDH12Q9NPG4 1184 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 DNAJC28Q9NX36 388 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 ATP8A1Q9Y2Q0 1164 aa15.46■□□□□ 0.07
NUP50-219ENST00000497960 ZSCAN12O43309 604 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 DKK1O94907 266 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 DGKAP23743 735 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 POLR2LP62875 67 aaKnown RBP15.45■□□□□ 0.06
NUP50-219ENST00000497960 SLC10A7Q0GE19 358 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 MMRN1Q13201 1228 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 PDE1CQ14123 709 aaPredicted RBP15.45■□□□□ 0.06
NUP50-219ENST00000497960 KANSL1Q7Z3B3 1105 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 PARGQ86W56 976 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 SYCE1Q8N0S2 351 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 FAM71BQ8TC56 605 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 CENPTQ96BT3 561 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 ALS2CR12Q96Q35 445 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 GPR27Q9NS67 375 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 PCDHGA1Q9Y5H4 931 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.45■□□□□ 0.06
NUP50-219ENST00000497960 CAPN6Q9Y6Q1 641 aa15.45■□□□□ 0.06
NUP50-219ENST00000497960 TDRD6O60522 2096 aaKnown RBP15.44■□□□□ 0.06
NUP50-219ENST00000497960 SPTY2D1-AS1A0A0U1RR47 76 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.44■□□□□ 0.06
NUP50-219ENST00000497960 GRID2IPA4D2P6 1211 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 TMEM8BA6NDV4 472 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 NEMP2A6NFY4 417 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 H3BM21 787 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 TOR1BO14657 336 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 RIOK3O14730 519 aaKnown RBP15.44■□□□□ 0.06
NUP50-219ENST00000497960 MUSKO15146 869 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 PSTPIP1O43586 416 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 MAFKO60675 156 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 PIAS2O75928 621 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 KRT1P04264 644 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 CD48P09326 243 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 C1SP09871 688 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 CDK4P11802 303 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 IL4RP24394 825 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 ARSEP51690 589 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 THOP1P52888 689 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 PFN3P60673 137 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 HNRNPKP61978 463 aaKnown RBP eCLIP15.44■□□□□ 0.06
NUP50-219ENST00000497960 DPYSL3Q14195 570 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 PTK2BQ14289 1009 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 FZD2Q14332 565 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 ATP13A4Q4VNC1 1196 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 ODF2Q5BJF6 829 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 ZNF542PQ5EBM4 170 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 MARC1Q5VT66 337 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 RHOT1Q8IXI2 618 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 GALNT15Q8N3T1 639 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 GATA6Q92908 595 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 ECHDC3Q96DC8 303 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 ZNF670Q9BS34 389 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 SCUBE2Q9NQ36 999 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 PYCARDQ9ULZ3 195 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 ALG6Q9Y672 507 aa15.44■□□□□ 0.06
NUP50-219ENST00000497960 IGF2RP11717 2491 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 A0A1W2PQ67 120 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 LZTS3O60299 673 aaPredicted RBP15.43■□□□□ 0.06
NUP50-219ENST00000497960 RFPL3O75679 317 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 PEX11BO96011 259 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 ALPPL2P10696 532 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 C6P13671 934 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 CKMT2P17540 419 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 IGFALSP35858 605 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 MMP13P45452 471 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 YPEL5P62699 121 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 DNAJC3Q13217 504 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 ZNF211Q13398 564 aaPredicted RBP15.43■□□□□ 0.06
NUP50-219ENST00000497960 LRRC14Q15048 493 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 ANKRD20A8PQ5CZ79 823 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 DHRS13Q6UX07 377 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 CCNI2Q6ZMN8 369 aaPredicted RBP15.43■□□□□ 0.06
NUP50-219ENST00000497960 ZNF662Q6ZS27 426 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 TMPRSS7Q7RTY8 843 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 ZSWIM9Q86XI8 627 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 SLC25A45Q8N413 288 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 RNF10Q8N5U6 811 aaKnown RBP15.43■□□□□ 0.06
NUP50-219ENST00000497960 KIAA1524Q8TCG1 905 aa15.43■□□□□ 0.06
NUP50-219ENST00000497960 NUDCD1Q96RS6 583 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms