RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
CTDSP1-214ENST00000497677 PCNX2A6NKB5 2137 aa16.12■□□□□ 0.17
CTDSP1-214ENST00000497677 NYNRINQ9P2P1 1898 aaKnown RBP16.12■□□□□ 0.17
CTDSP1-214ENST00000497677 CABIN1Q9Y6J0 2220 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 TTC24A2A3L6 582 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 ZNF487B1APH4 448 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 TRAFD1O14545 582 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 SPOPO43791 374 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 DFNA5O60443 496 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 TUBBP07437 444 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 COMTP21964 271 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 KCNA4P22459 653 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 HNRNPA2B1P22626 353 aaKnown RBP16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 CTNNA2P26232 953 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 CLDN2P57739 230 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 GALNT2Q10471 571 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 UGP2Q16851 508 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 SLC45A4Q5BKX6 768 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 GCNT7Q6ZNI0 430 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 ABI3BPQ7Z7G0 1075 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 CREG2Q8IUH2 290 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 ACTRT1Q8TDG2 376 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 ASB12Q8WXK4 309 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 UBXN4Q92575 508 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 ECHDC3Q96DC8 303 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 LENG8Q96PV6 779 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 MYOCQ99972 504 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 GDF3Q9NR23 364 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 PCOLCE2Q9UKZ9 415 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 TTC7AQ9ULT0 858 aaPredicted RBP16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 HS3ST3A1Q9Y663 406 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 ADAMTS9Q9P2N4 1935 aa16.11■□□□□ 0.17
CTDSP1-214ENST00000497677 MAP3K6O95382 1288 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 PMLP29590 882 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 AKT2P31751 481 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 CTNNA1P35221 906 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 GARSP41250 739 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 RXRGP48443 463 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 SCNN1BP51168 640 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 RENBPP51606 427 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 SUOXP51687 545 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 GBE1Q04446 702 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 TMEM52BQ4KMG9 183 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 CCDC70Q6NSX1 233 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 BRAT1Q6PJG6 821 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 VSIG1Q86XK7 387 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 ATPAF2Q8N5M1 289 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 TEX26Q8N6G2 289 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 BAHD1Q8TBE0 780 aaPredicted RBP16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 SPOCK2Q92563 424 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 MAML1Q92585 1016 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 KLHDC7BQ96G42 594 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 TSGA13Q96PP4 275 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 MGME1Q9BQP7 344 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 PCDH12Q9NPG4 1184 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 GPR27Q9NS67 375 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 WASF3Q9UPY6 502 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 BTBD3Q9Y2F9 522 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 PCDHA3Q9Y5H8 950 aa16.1■□□□□ 0.17
CTDSP1-214ENST00000497677 SPAARA0A1B0GVQ0 90 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 LRRD1A4D1F6 860 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 POM121BA6NF01 834 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 NEMP1O14524 444 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 PSTPIP1O43586 416 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 MMP20O60882 483 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 HSPA9P38646 679 aaKnown RBP16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 CCT8P50990 548 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 AP1S1P61966 158 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 IL9RQ01113 521 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 BCL2L1Q07817 233 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 HNRNPDQ14103 355 aaKnown RBP16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 PPP2R5EQ16537 467 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 RHOT1Q8IXI2 618 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 PLD5Q8N7P1 536 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 OR13H1Q8NG92 308 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 SAP25Q8TEE9 199 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 FATE1Q969F0 183 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 CENPTQ96BT3 561 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 NUDCD1Q96RS6 583 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 GOLPH3Q9H4A6 298 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 ATP13A3Q9H7F0 1226 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 NOD2Q9HC29 1040 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 DTLQ9NZJ0 730 aa16.09■□□□□ 0.17
CTDSP1-214ENST00000497677 MATN3O15232 486 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 DDX3YO15523 660 aaKnown RBP16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 FLRT2O43155 660 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 HTRA2O43464 458 aaPredicted RBP16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 MAGEC1O60732 1142 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 PRKCGP05129 697 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 THEGLP0DJG4 465 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 CCNCP24863 283 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 SERPINA4P29622 427 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 MMP13P45452 471 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 RWDD2BP57060 319 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 MAXP61244 160 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 SIM1P81133 766 aaPredicted RBP16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 SGCGQ13326 291 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 ZNF235Q14590 738 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 IHHQ14623 411 aa16.08■□□□□ 0.16
CTDSP1-214ENST00000497677 SUZ12Q15022 739 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms