RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	HSD17B4	P51659	736 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	LAPTM5	Q13571	262 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	DHRS4L2	Q6PKH6	230 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	C15orf39	Q6ZRI6	1047 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	USP43	Q70EL4	1123 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ANKRD13B	Q86YJ7	626 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CDAN1	Q8IWY9	1227 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	NCLN	Q969V3	563 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CENPN	Q96H22	339 aa	Predicted RBP	10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	SPATA13	Q96N96	652 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	KCTD14	Q9BQ13	255 aa	Predicted RBP	10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	FEM1A	Q9BSK4	669 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	SUCO	Q9UBS9	1254 aa	Known RBP	10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	KIAA1551	Q9HCM1	1747 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	C16orf96	A6NNT2	1141 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	PDZK1P1	A8MUH7	402 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597		H0YCG3	227 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	SDHD	O14521	159 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	HS6ST1	O60243	411 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TBC1D4	O60343	1298 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	GSN	P06396	782 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ASNS	P08243	561 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CXCR3	P49682	368 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	RAB15	P59190	212 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	RACK1	P63244	317 aa	Known RBP	10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	VAC14	Q08AM6	782 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CNST	Q6PJW8	725 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	SPESP1	Q6UW49	350 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CATSPER4	Q7RTX7	472 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ERO1B	Q86YB8	467 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	IPMK	Q8NFU5	416 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	OR6B3	Q8NGW1	331 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CLEC4C	Q8WTT0	213 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	BEX2	Q9BXY8	128 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TRIT1	Q9H3H1	467 aa	Known RBP	10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	SMURF2	Q9HAU4	748 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	MKS1	Q9NXB0	559 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	USP22	Q9UPT9	525 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ITM2B	Q9Y287	266 aa		10.68	□□□□□ -0.7
TRAPPC12-223	ENST00000497597		A0A0J9YYE9	177 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	LOC100506127	A0A0U1RQW1	187 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	MFSD11	O43934	449 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	PRKCG	P05129	697 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	BDNF	P23560	247 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	FMO4	P31512	558 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	SFN	P31947	248 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	LIMK2	P53671	638 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TGFB2	P61812	414 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	C6orf10	Q5SRN2	563 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	UGT3A1	Q6NUS8	523 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TAF2	Q6P1X5	1199 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TIFAB	Q6ZNK6	161 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	EPHX4	Q8IUS5	362 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	NIPA2	Q8N8Q9	360 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	DCBLD1	Q8N8Z6	715 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	GMCL1P1	Q8NEA9	526 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	RORB	Q92753	470 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	PRMT6	Q96LA8	375 aa	Predicted RBP	10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ELOVL4	Q9GZR5	314 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	JPH1	Q9HDC5	661 aa	Predicted RBP	10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	WDR6	Q9NNW5	1121 aa	Known RBP	10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ADPRHL2	Q9NX46	363 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.67	□□□□□ -0.7	2e-7	■■■■□ 25.2
TRAPPC12-223	ENST00000497597	ANAPC2	Q9UJX6	822 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	UGT2A1	Q9Y4X1	527 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ADGRA2	Q96PE1	1338 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	GSTA4	O15217	222 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TIMM44	O43615	452 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	NR3C2	P08235	984 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	STMN1	P16949	149 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	MYF6	P23409	242 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	DCK	P27707	260 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	NDST1	P52848	882 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	NCS1	P62166	190 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	YWHAH	Q04917	246 aa	Predicted RBP	10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	INSC	Q1MX18	579 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TMTC4	Q5T4D3	741 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	DCLRE1A	Q6PJP8	1040 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	HS3ST5	Q8IZT8	346 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	MIER2	Q8N344	545 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	OR10Q1	Q8NGQ4	319 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	NDNF	Q8TB73	568 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	MAGED4	Q96JG8	741 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ST6GALNAC4	Q9H4F1	302 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	RPF1	Q9H9Y2	349 aa	Known RBP	10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ENTPD7	Q9NQZ7	604 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	DTL	Q9NZJ0	730 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	VTI1B	Q9UEU0	232 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	ILVBL	A1L0T0	632 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	PCP4L1	A6NKN8	68 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597		H0Y626	953 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CYP7B1	O75881	506 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	BBOX1	O75936	387 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	TRIM16	O95361	564 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	UGT2B4	P06133	528 aa		10.67	□□□□□ -0.7
TRAPPC12-223	ENST00000497597	CAPN1	P07384	714 aa		10.67	□□□□□ -0.7

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