RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SHMT1P34896 483 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 ARL3P36405 182 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 PBX3P40426 434 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 ENTPD1P49961 510 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 PMS2P54278 862 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 ADORA2A-AS1P86434 159 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 MAMLD1Q13495 774 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 FGFBP1Q14512 234 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 TCTN1Q2MV58 587 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 ALG11Q2TAA5 492 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 ZNF284Q2VY69 593 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 SLC45A4Q5BKX6 768 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 SGO1Q5FBB7 561 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 MZT2BQ6NZ67 158 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 TMED8Q6PL24 325 aaPredicted RBP4.96□□□□□ -1.62
VPS36-206ENST00000497149 MON1BQ7L1V2 547 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 SFTPA2Q8IWL1 248 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 TMEM116Q8NCL8 245 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 NEK9Q8TD19 979 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 SMG7Q92540 1137 aaKnown RBP4.96□□□□□ -1.62
VPS36-206ENST00000497149 SMARCE1Q969G3 411 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 FAM149B1Q96BN6 582 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 FBXL8Q96CD0 374 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 ZNF48Q96MX3 618 aaPredicted RBP4.96□□□□□ -1.62
VPS36-206ENST00000497149 ITPAQ9BY32 194 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 MUC13Q9H3R2 512 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 MAGEE1Q9HCI5 957 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 BPIFA1Q9NP55 256 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 ASAH2Q9NR71 780 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 CYSLTR2Q9NS75 346 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 SLC6A13Q9NSD5 602 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 LIMA1Q9UHB6 759 aaKnown RBP4.96□□□□□ -1.62
VPS36-206ENST00000497149 SLCO3A1Q9UIG8 710 aa4.96□□□□□ -1.62
VPS36-206ENST00000497149 LAS1LQ9Y4W2 734 aaKnown RBP4.96□□□□□ -1.62
VPS36-206ENST00000497149 KDM4EB2RXH2 506 aaPredicted RBP4.95□□□□□ -1.62
VPS36-206ENST00000497149 B4DGG1 531 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 H3BNX3 289 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 TNFRSF13BO14836 293 aaPredicted RBP4.95□□□□□ -1.62
VPS36-206ENST00000497149 BCAT2O15382 392 aaPredicted RBP4.95□□□□□ -1.62
VPS36-206ENST00000497149 PAGE4O60829 102 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 ACADMP11310 421 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 RFX2P48378 723 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 PIP4K2AP48426 406 aaPredicted RBP4.95□□□□□ -1.62
VPS36-206ENST00000497149 ST3GAL1Q11201 340 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 OLIG2Q13516 323 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 MYBPC2Q14324 1141 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 FRG1Q14331 258 aaKnown RBP4.95□□□□□ -1.62
VPS36-206ENST00000497149 MED22Q15528 200 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 COL28A1Q2UY09 1125 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 DPCR1Q3MIW9 517 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 WDR78Q5VTH9 848 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 OTUD1Q5VV17 481 aaPredicted RBP4.95□□□□□ -1.62
VPS36-206ENST00000497149 TSSK4Q6SA08 328 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 KLHL24Q6TFL4 600 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 CYP20A1Q6UW02 462 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 GSTA5Q7RTV2 222 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 CCDC105Q8IYK2 499 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 USP6NLQ92738 828 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 FCRL4Q96PJ5 515 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 BARD1Q99728 777 aaKnown RBP4.95□□□□□ -1.62
VPS36-206ENST00000497149 TREX2Q9BQ50 279 aaPredicted RBP4.95□□□□□ -1.62
VPS36-206ENST00000497149 TKTL2Q9H0I9 626 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 FAM234AQ9H0X4 552 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 FBRSL1Q9HCM7 1045 aaKnown RBP4.95□□□□□ -1.62
VPS36-206ENST00000497149 PLK2Q9NYY3 685 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 EHD2Q9NZN4 543 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 IL36RNQ9UBH0 155 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 SQORQ9Y6N5 450 aa4.95□□□□□ -1.62
VPS36-206ENST00000497149 FAM237BA0A1B0GVD1 139 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 A0A1W2PQF6 199 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 A0A1W2PRG0 241 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 LIPT2A6NK58 231 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 VWA5AO00534 786 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 SPRY3O43610 288 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 ITM2AO43736 263 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 DOK2O60496 412 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 PTP4A3O75365 173 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 SOX30O94993 753 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 EIF2S1P05198 315 aaKnown RBP4.94□□□□□ -1.62
VPS36-206ENST00000497149 MMP2P08253 660 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 NAGAP17050 411 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 ARF3P61204 181 aaPredicted RBP4.94□□□□□ -1.62
VPS36-206ENST00000497149 ARF1P84077 181 aaKnown RBP4.94□□□□□ -1.62
VPS36-206ENST00000497149 SHBQ15464 509 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 FSCBQ5H9T9 825 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 DNTTIP2Q5QJE6 756 aaKnown RBP4.94□□□□□ -1.62
VPS36-206ENST00000497149 FNBP1LQ5T0N5 605 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 TTI2Q6NXR4 508 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 FBXO46Q6PJ61 603 aaPredicted RBP4.94□□□□□ -1.62
VPS36-206ENST00000497149 LCTLQ6UWM7 567 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 TECPR1Q7Z6L1 1165 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 PDILTQ8N807 584 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 FRMD1Q8N878 549 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 CREB3L4Q8TEY5 395 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 ARHGEF2Q92974 986 aaKnown RBP4.94□□□□□ -1.62
VPS36-206ENST00000497149 SLITRK1Q96PX8 696 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 RBM38Q9H0Z9 239 aaKnown RBP4.94□□□□□ -1.62
VPS36-206ENST00000497149 KIF9Q9HAQ2 790 aa4.94□□□□□ -1.62
VPS36-206ENST00000497149 CLK4Q9HAZ1 481 aaKnown RBP4.94□□□□□ -1.62
VPS36-206ENST00000497149 DDX4Q9NQI0 724 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms