RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 NKAPQ8N5F7 415 aaKnown RBP8.42□□□□□ -1.06
USP54-215ENST00000497106 NETO2Q8NC67 525 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 OSCP1Q8WVF1 389 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 BRD9Q9H8M2 597 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 NDFIP2Q9NV92 336 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.42□□□□□ -1.06
USP54-215ENST00000497106 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.42□□□□□ -1.06
USP54-215ENST00000497106 DNMT3BQ9UBC3 853 aaKnown RBP8.42□□□□□ -1.06
USP54-215ENST00000497106 VPS51Q9UID3 782 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 CDH7Q9ULB5 785 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 RFPL2O75678 378 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 MT-CYBP00156 380 aaPredicted RBP8.42□□□□□ -1.06
USP54-215ENST00000497106 WEE1P30291 646 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 SLC6A4P31645 630 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 AKT1P31749 480 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 CACNG1Q06432 222 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 C22orf39Q6P5X5 142 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 SERPINA13PQ6UXR4 307 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 TIFABQ6ZNK6 161 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 SPATA21Q7Z572 469 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 ATXN7L3BQ96GX2 97 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 TM6SF2Q9BZW4 377 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 WWP1Q9H0M0 922 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 ACTR5Q9H9F9 607 aaPredicted RBP8.42□□□□□ -1.06
USP54-215ENST00000497106 ARL2BPQ9Y2Y0 163 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 A0A096LPK6 155 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 EDDM13A0A1B0GTR0 161 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 CCDC189A1A4V9 331 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 CCDC78A2IDD5 438 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 TCP11X1B4DZS4 312 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 SLCO1B7G3V0H7 640 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 CD3EAPO15446 510 aaKnown RBP8.42□□□□□ -1.06
USP54-215ENST00000497106 GYS2P54840 703 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 LMAN2Q12907 356 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 GALNT3Q14435 633 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 LRRC14Q15048 493 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 STXBP5Q5T5C0 1151 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 ARHGAP36Q6ZRI8 547 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 GAREM2Q75VX8 874 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 TDHQ8IZJ6 230 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 FOPNLQ96NB1 174 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 FAM111AQ96PZ2 611 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 SLC46A2Q9BY10 475 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 ACE2Q9BYF1 805 aaPredicted RBP8.42□□□□□ -1.06
USP54-215ENST00000497106 ZFYVE1Q9HBF4 777 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 GPAMQ9HCL2 828 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 TRIM33Q9UPN9 1127 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 CHKBQ9Y259 395 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 PCDHB9Q9Y5E1 797 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 TANC1Q9C0D5 1861 aa8.42□□□□□ -1.06
USP54-215ENST00000497106 WDR91A4D1P6 747 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 LZTS3O60299 673 aaPredicted RBP8.41□□□□□ -1.06
USP54-215ENST00000497106 HNRNPCL1O60812 293 aaKnown RBP8.41□□□□□ -1.06
USP54-215ENST00000497106 OR56A5P0C7T3 313 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 ZNF30P17039 623 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 GJA1P17302 382 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 CRHR1P34998 444 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 MAPK9P45984 424 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 HK2P52789 917 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 GPX6P59796 221 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 RAB10P61026 200 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 USP4Q13107 963 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 ASB2Q96Q27 587 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 CCT8L2Q96SF2 557 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 TRMT61BQ9BVS5 477 aaKnown RBP8.41□□□□□ -1.06
USP54-215ENST00000497106 RNF38Q9H0F5 515 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 IL21Q9HBE4 155 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 ARNT2Q9HBZ2 717 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 TXLNGQ9NUQ3 528 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.41□□□□□ -1.06
USP54-215ENST00000497106 FCF1Q9Y324 198 aaKnown RBP8.41□□□□□ -1.06
USP54-215ENST00000497106 SPAM1P38567 509 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 CCR3P51677 355 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 CRADDP78560 199 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 BMPR2Q13873 1038 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 ITIH4Q14624 930 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 SYTL3Q4VX76 610 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 FSCBQ5H9T9 825 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 LY6G5CQ5SRR4 150 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 TTC23LQ6PF05 361 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 RBFAQ8N0V3 343 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 CKAP2Q8WWK9 683 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 MRGPRX2Q96LB1 330 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 PRKAG3Q9UGI9 489 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 EVLQ9UI08 416 aaPredicted RBP8.41□□□□□ -1.06
USP54-215ENST00000497106 NCKAP1Q9Y2A7 1128 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 PDCD11Q14690 1871 aaKnown RBP8.41□□□□□ -1.06
USP54-215ENST00000497106 TPP1O14773 563 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 ALDH1A2O94788 518 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 ATP6V0D1P61421 351 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 MYLK3Q32MK0 819 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 SIRPB2Q5JXA9 342 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 FBXL19Q6PCT2 694 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 CES3Q6UWW8 571 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 ACAD11Q709F0 780 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 MYO1HQ8N1T3 1032 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 ARMC2Q8NEN0 867 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 GDPD5Q8WTR4 605 aa8.41□□□□□ -1.06
USP54-215ENST00000497106 ZNF473Q8WTR7 871 aaKnown RBP8.41□□□□□ -1.06
USP54-215ENST00000497106 SKA2Q8WVK7 121 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms