RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 DDX17Q92841 729 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TSPAN17Q96FV3 270 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ZDHHC12Q96GR4 267 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 MAGED4Q96JG8 741 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PPP1R36Q96LQ0 422 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CLIC6Q96NY7 704 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNC2Q96PR1 638 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 BBS4Q96RK4 519 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CENPKQ9BS16 269 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 MRPL37Q9BZE1 423 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 REXO4Q9GZR2 422 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 KCNH6Q9H252 994 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 HIPK3Q9H422 1215 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 JMJD4Q9H9V9 463 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 NOD2Q9HC29 1040 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 DMRT3Q9NQL9 472 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SNTG1Q9NSN8 517 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 NRBP2Q9NSY0 501 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SYBUQ9NX95 663 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 STMN3Q9NZ72 180 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 BAIAP2L1Q9UHR4 511 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TINAGQ9UJW2 476 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ERVK-11Q9UQG0 969 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC22A14Q9Y267 594 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 DLGAP4Q9Y2H0 992 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF175Q9Y473 711 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDHGA9Q9Y5G4 932 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDHGA8Q9Y5G5 932 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDHGA7Q9Y5G6 932 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PCDHGA6Q9Y5G7 932 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SNX13Q9Y5W8 968 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CDK12Q9NYV4 1490 aaPredicted RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 XKRY2A2RUG3 117 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PRAMEF25A6NGN4 478 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ATP6V1G2-DDX39BF2Z307 99 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TRIM77I1YAP6 450 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PGRMC1O00264 195 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PPEF2O14830 753 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 POLR1CO15160 346 aaPredicted RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CACNG3O60359 315 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CNOT3O75175 753 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 UFL1O94874 794 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ATP6V1G2O95670 118 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 BAG3O95817 575 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 MBD3O95983 291 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 IL18BPO95998 194 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SERPINF2P08697 491 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 DLDP09622 509 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CHRM3P20309 590 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SP100P23497 879 aaPredicted RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ITGB8P26012 769 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ADSSP30520 456 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 MAT2AP31153 395 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 NUDT1P36639 197 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ADCYAP1R1P41586 468 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CLK3P49761 638 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ARFIP2P53365 341 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PRRX1P54821 245 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ARL4CP56559 192 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 OCRLQ01968 901 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 FCHO2Q0JRZ9 810 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 USP10Q14694 798 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 LASP1Q14847 261 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 DLGAP5Q15398 846 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TSTQ16762 297 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF805Q5CZA5 627 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 FIGNQ5HY92 759 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TMEM31Q5JXX7 168 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 IZUMO3Q5VZ72 239 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 AFMIDQ63HM1 303 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 UNQ6494/PRO21346Q6UXR6 183 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TPGS1Q6ZTW0 290 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CACNA2D4Q7Z3S7 1137 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 B3GNT8Q7Z7M8 397 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PATL1Q86TB9 770 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ZNF761Q86XN6 746 aaPredicted RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PROSER1Q86XN7 944 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 MMAAQ8IVH4 418 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CCDC28AQ8IWP9 274 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CRYBG2Q8N1P7 616 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 KLHL36Q8N4N3 616 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ARFGAP2Q8N6H7 521 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 LINC01356Q8N9X3 169 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 FNDC8Q8TC99 324 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 ZCCHC14Q8WYQ9 949 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SEC14L1Q92503 715 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 IP6K1Q92551 441 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 P3H4Q92791 437 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SPACA9Q96E40 222 aaPredicted RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 NSMCE2Q96MF7 247 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 TOX2Q96NM4 488 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 GBP5Q96PP8 586 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PRAM1Q96QH2 718 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 PANX2Q96RD6 677 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 CYTH2Q99418 400 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 RBM4BQ9BQ04 359 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 SPXQ9BT56 116 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 RBM4Q9BWF3 364 aaKnown RBP3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 IMPG2Q9BZV3 1241 aa3.14□□□□□ -1.91
SNRNP48-202ENST00000496946 EPB41L1Q9H4G0 881 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms