RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 MMTAG2Q9BU76 263 aaKnown RBP5.79□□□□□ -1.48
SF3B1-212ENST00000496458 HEMGNQ9BXL5 484 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 RETREG1Q9H6L5 497 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 GAREM1Q9H706 876 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 DDX31Q9H8H2 851 aaKnown RBP5.79□□□□□ -1.48
SF3B1-212ENST00000496458 ZNF556Q9HAH1 456 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 NFS1Q9Y697 457 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 SLC16A5O15375 505 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 ZIC3O60481 467 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 TACC1O75410 805 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 MTA2O94776 668 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 NDUFB4O95168 129 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 HNRNPA1P09651 372 aaKnown RBP eCLIP5.78□□□□□ -1.48
SF3B1-212ENST00000496458 IGHV4-30-4P0DP06 118 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 ITGAXP20702 1163 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 GGT5P36269 586 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 EFNA5P52803 228 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 TLE2Q04725 743 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 SETMARQ53H47 684 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-212ENST00000496458 GORABQ5T7V8 394 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 NOXA1Q86UR1 476 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 ZNF354CQ86Y25 554 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 MYRIPQ8NFW9 859 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 SCMH1Q96GD3 660 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 DUX5Q96PT3 197 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 OR1F2PQ96R84 312 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 BBS4Q96RK4 519 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 LBHD1Q9BQE6 289 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-212ENST00000496458 SMYD2Q9NRG4 433 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 GGA3Q9NZ52 723 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 SLC9A2Q9UBY0 812 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 ZNF112Q9UJU3 913 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 CDC14AQ9UNH5 594 aa5.78□□□□□ -1.48
SF3B1-212ENST00000496458 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.78□□□□□ -1.48
SF3B1-212ENST00000496458 RRN3P2A6NIE6 340 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 WNT9BO14905 357 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 BCAT2O15382 392 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-212ENST00000496458 CHATP28329 748 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 MAPK9P45984 424 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 DLG1Q12959 904 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 GRIK3Q13003 919 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 TRPC3Q13507 836 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 ZRSR2Q15696 482 aaKnown RBP5.77□□□□□ -1.49
SF3B1-212ENST00000496458 CALCRLQ16602 461 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 CPXCR1Q8N123 301 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 C11orf65Q8NCR3 313 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 ZBTB10Q96DT7 871 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 MPHOSPH8Q99549 860 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 NOX4Q9NPH5 578 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 C20orf141Q9NUB4 165 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 HCN3Q9P1Z3 774 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 HSPB7Q9UBY9 170 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 ICAM5Q9UMF0 924 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 SNX9Q9Y5X1 595 aa5.77□□□□□ -1.49
SF3B1-212ENST00000496458 GAGE10A6NGK3 116 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 NPIPB11E5RHQ5 1161 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 HEXAP06865 529 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 SNRNP70P08621 437 aaKnown RBP5.76□□□□□ -1.49
SF3B1-212ENST00000496458 ETFAP13804 333 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 GALNT2Q10471 571 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 EXOC8Q8IYI6 725 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 USP13Q92995 863 aaPredicted RBP5.76□□□□□ -1.49
SF3B1-212ENST00000496458 CSF3RQ99062 836 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 FUZQ9BT04 418 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 SAGE1Q9NXZ1 904 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 BCCIPQ9P287 314 aaKnown RBP eCLIP5.76□□□□□ -1.49
SF3B1-212ENST00000496458 SLCO3A1Q9UIG8 710 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 TBX20Q9UMR3 447 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 NFE2L3Q9Y4A8 694 aa5.76□□□□□ -1.49
SF3B1-212ENST00000496458 NOTCH4Q99466 2003 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 SAA2-SAA4A0A096LPE2 208 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 TEX13CA0A0J9YWL9 993 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 CPED1A4D0V7 1026 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 TNPO2O14787 897 aaKnown RBP5.75□□□□□ -1.49
SF3B1-212ENST00000496458 NCAM2O15394 837 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 LDB3O75112 727 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 RPP30P78346 268 aaKnown RBP5.75□□□□□ -1.49
SF3B1-212ENST00000496458 GPR68Q15743 365 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 EFNB3Q15768 340 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 MMEL1Q495T6 779 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 FAM76BQ5HYJ3 339 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 RRM2BQ7LG56 351 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 TDRPQ86YL5 185 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 CREB3L4Q8TEY5 395 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 FBXL8Q96CD0 374 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 BICD1Q96G01 975 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 SLITRK1Q96PX8 696 aa5.75□□□□□ -1.49
SF3B1-212ENST00000496458 DDX4Q9NQI0 724 aaKnown RBP5.75□□□□□ -1.49
SF3B1-212ENST00000496458 SLC25A10Q9UBX3 287 aaPredicted RBP5.75□□□□□ -1.49
SF3B1-212ENST00000496458 CLGNO14967 610 aa5.74□□□□□ -1.49
SF3B1-212ENST00000496458 GAGE7O76087 117 aa5.74□□□□□ -1.49
SF3B1-212ENST00000496458 ZNF432O94892 652 aa5.74□□□□□ -1.49
SF3B1-212ENST00000496458 KDM4BO94953 1096 aa5.74□□□□□ -1.49
SF3B1-212ENST00000496458 GAGE12FP0CL80 117 aa5.74□□□□□ -1.49
SF3B1-212ENST00000496458 GAGE12GP0CL81 117 aa5.74□□□□□ -1.49
SF3B1-212ENST00000496458 GAGE12IP0CL82 117 aa5.74□□□□□ -1.49
SF3B1-212ENST00000496458 CD58P19256 250 aa5.74□□□□□ -1.49
SF3B1-212ENST00000496458 GPTP24298 496 aa5.74□□□□□ -1.49
SF3B1-212ENST00000496458 HNRNPH1P31943 449 aaKnown RBP5.74□□□□□ -1.49
SF3B1-212ENST00000496458 UFM1P61960 85 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms