RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 IGBP1P78318 339 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 NIPAL4Q0D2K0 466 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 LAMC2Q13753 1193 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TPSAB1Q15661 275 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 ZNF484Q5JVG2 852 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SLC16A12Q6ZSM3 486 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 PRSS48Q7RTY5 328 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 EPHX4Q8IUS5 362 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SPARTQ8N0X7 666 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 RDH11Q8TC12 318 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 PEX13Q92968 403 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SDCCAG3Q96C92 435 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SIGLEC10Q96LC7 697 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 WDR11Q9BZH6 1224 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SPATC1LQ9H0A9 340 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 RAB6BQ9NRW1 208 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SAGE1Q9NXZ1 904 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 IL20Q9NYY1 176 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TMEM216Q9P0N5 145 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TMEM181Q9P2C4 612 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TXNDC16Q9P2K2 825 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SLC9A2Q9UBY0 812 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 MKI67P46013 3256 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 CENPXA8MT69 81 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 WDR64B1ANS9 1081 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 CCRL2O00421 344 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 RAD51BO15315 384 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 ZW10O43264 779 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 GAS7O60861 476 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 FKTNO75072 461 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TSPAN9O75954 239 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 GABARAPO95166 117 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 NADKO95544 446 aaPredicted RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 BMP4P12644 408 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 GNA15P30679 374 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SSTR3P32745 418 aaPredicted RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 POLR2IP36954 125 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 ALDH7A1P49419 539 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 ATXN3P54252 364 aaPredicted RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 SLC25A11Q02978 314 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 TNFAIP2Q03169 654 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 RAD51Q06609 339 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 AQP6Q13520 282 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TFDP2Q14188 446 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 POU6F1Q14863 301 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 FXNQ16595 210 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 FAM110CQ1W6H9 321 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 QRICH1Q2TAL8 776 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 C2CD6Q53TS8 623 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TBCELQ5QJ74 424 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 LDLRAP1Q5SW96 308 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 NDUFAF5Q5TEU4 345 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 AGAP6Q5VW22 663 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 LGI2Q8N0V4 545 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SVOPQ8N4V2 548 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 ZSWIM2Q8NEG5 633 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 REPS2Q8NFH8 660 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SPATA18Q8TC71 538 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 HDAC2Q92769 488 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 UBXN10Q96LJ8 280 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 AGAP4Q96P64 663 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 DNAI2Q9GZS0 605 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 MKRN2Q9H000 416 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 PCDHAC1Q9H158 963 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 IRF2BPLQ9H1B7 796 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 RNPEPQ9H4A4 650 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SYTL2Q9HCH5 934 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 HPS4Q9NQG7 708 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TBC1D13Q9NVG8 400 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 PAK1IP1Q9NWT1 392 aaPredicted RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 CAB39Q9Y376 341 aaPredicted RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 A6NL46 340 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SNTNA6NMZ2 147 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 M0R3G1 203 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TNPO2O14787 897 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 SYNCRIPO60506 623 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 NDST3O95803 873 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 MYL3P08590 195 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 EEF1B2P24534 225 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 EIF2DP41214 584 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 MAGEA12P43365 314 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 PTPN9P43378 593 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 RPS9P46781 194 aaKnown RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 AP2S1P53680 142 aaPredicted RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 DYNLT1P63172 113 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 MTM1Q13496 603 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 GALNT3Q14435 633 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 CTF1Q16619 201 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 UBE2UQ5VVX9 321 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SYCE2Q6PIF2 218 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 C15orf39Q6ZRI6 1047 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 FAM160B2Q86V87 743 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 RALGPS2Q86X27 583 aaPredicted RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 LYSMD2Q8IV50 215 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 CANT1Q8WVQ1 401 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 MUL1Q969V5 352 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 MCEEQ96PE7 176 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 DEPDC7Q96QD5 511 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 KIFC3Q9BVG8 833 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms