RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 LMX1AQ8TE12 382 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 CXorf40AQ8TE69 158 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 TEKT4Q8WW24 435 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 CASKIN2Q8WXE0 1202 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 CENPTQ96BT3 561 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 HMCESQ96FZ2 354 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 EPAS1Q99814 870 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 BAG1Q99933 345 aaPredicted RBP14.54□□□□□ -0.08
CXCL12-208ENST00000496375 PRORYQ9H606 182 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 CTTNBP2NLQ9P2B4 639 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 RAI2Q9Y5P3 530 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 PTPRQQ9UMZ3 2332 aa14.54□□□□□ -0.08
CXCL12-208ENST00000496375 WASH4PA8MWX3 477 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 RASA4BC9J798 803 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 RASA4O43374 803 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 PRPSAP2O60256 369 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 CSO75390 466 aaKnown RBP14.53□□□□□ -0.08
CXCL12-208ENST00000496375 TM7SF2O76062 418 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 MPOP05164 745 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 TIMP2P16035 220 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 ARHGAP25P42331 645 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 THOP1P52888 689 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 YBEYP58557 167 aaPredicted RBP14.53□□□□□ -0.08
CXCL12-208ENST00000496375 SLC25A11Q02978 314 aaKnown RBP14.53□□□□□ -0.08
CXCL12-208ENST00000496375 CCDC173Q0VFZ6 552 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 SERINC3Q13530 473 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 PTK2BQ14289 1009 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 PARP15Q460N3 678 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 BOLA3Q53S33 107 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 INO80DQ53TQ3 878 aaPredicted RBP14.53□□□□□ -0.08
CXCL12-208ENST00000496375 ERMARDQ5T6L9 678 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 GUSBP11Q6P575 273 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 RAD9BQ6WBX8 426 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 RBFAQ8N0V3 343 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 SPC24Q8NBT2 197 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 SLC35G2Q8TBE7 412 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 BTN2A2Q8WVV5 523 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 EXOC2Q96KP1 924 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 UBL7Q96S82 380 aaPredicted RBP14.53□□□□□ -0.08
CXCL12-208ENST00000496375 WRAP53Q9BUR4 548 aaKnown RBP14.53□□□□□ -0.08
CXCL12-208ENST00000496375 SNRNP25Q9BV90 132 aaKnown RBP14.53□□□□□ -0.08
CXCL12-208ENST00000496375 C1QTNF7Q9BXJ2 289 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 TCEAL2Q9H3H9 227 aaPredicted RBP14.53□□□□□ -0.08
CXCL12-208ENST00000496375 CATSPERBQ9H7T0 1116 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 LUC7LQ9NQ29 371 aaKnown RBP14.53□□□□□ -0.08
CXCL12-208ENST00000496375 NCKIPSDQ9NZQ3 722 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 SPASTQ9UBP0 616 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 APOBEC3BQ9UH17 382 aaKnown RBP14.53□□□□□ -0.08
CXCL12-208ENST00000496375 SALL4Q9UJQ4 1053 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 AP4E1Q9UPM8 1137 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 MFHAS1Q9Y4C4 1052 aa14.53□□□□□ -0.08
CXCL12-208ENST00000496375 CPED1A4D0V7 1026 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 BTNL10A8MVZ5 291 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 INSIG1O15503 277 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 USP12O75317 370 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 IL1R2P27930 398 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 MAGEA1P43355 309 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 HCAR3P49019 387 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 YPEL5P62699 121 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 GABREP78334 506 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 C1orf61Q13536 156 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 CYTH1Q15438 398 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 DPYSL2Q16555 572 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 PRRT3Q5FWE3 981 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 EFL1Q7Z2Z2 1120 aaKnown RBP14.52□□□□□ -0.09
CXCL12-208ENST00000496375 PHACTR4Q8IZ21 702 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 UMODL1-AS1Q8N2C9 162 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 TP53I13Q8NBR0 393 aaPredicted RBP14.52□□□□□ -0.09
CXCL12-208ENST00000496375 FAM71BQ8TC56 605 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 BTBD6Q96KE9 485 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 FCRL3Q96P31 734 aaPredicted RBP14.52□□□□□ -0.09
CXCL12-208ENST00000496375 IL12RB2Q99665 862 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 MBNL1Q9NR56 388 aaKnown RBP14.52□□□□□ -0.09
CXCL12-208ENST00000496375 DKK3Q9UBP4 350 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 LHX3Q9UBR4 397 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 PNMA8BQ9ULN7 279 aaPredicted RBP14.52□□□□□ -0.09
CXCL12-208ENST00000496375 REXO2Q9Y3B8 237 aaKnown RBP14.52□□□□□ -0.09
CXCL12-208ENST00000496375 PCDHA13Q9Y5I0 950 aa14.52□□□□□ -0.09
CXCL12-208ENST00000496375 LRRK1Q38SD2 2015 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 EME2A4GXA9 379 aaPredicted RBP14.51□□□□□ -0.09
CXCL12-208ENST00000496375 TPP1O14773 563 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 FGF10O15520 208 aaPredicted RBP14.51□□□□□ -0.09
CXCL12-208ENST00000496375 PJA2O43164 708 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 GCATO75600 419 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 PIGNO95427 931 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 TCF4P15884 667 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 TGM2P21980 687 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 XPAP23025 273 aaPredicted RBP14.51□□□□□ -0.09
CXCL12-208ENST00000496375 TPI1P60174 286 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 TLE3Q04726 772 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 ELP6Q0PNE2 266 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 NR0B2Q15466 257 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 SPA17Q15506 151 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 CA9Q16790 459 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 FAXCQ5TGI0 409 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 CRTC1Q6UUV9 634 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 MACC1Q6ZN28 852 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 SPACA3Q8IXA5 215 aa14.51□□□□□ -0.09
CXCL12-208ENST00000496375 NAF1Q96HR8 494 aaKnown RBP14.51□□□□□ -0.09
CXCL12-208ENST00000496375 CALR3Q96L12 384 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms