RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-223	ENST00000496296	CHRAC1	Q9NRG0	131 aa		21.34	■■□□□ 1.01
FGFR1-223	ENST00000496296	IL1RAPL1	Q9NZN1	696 aa		21.34	■■□□□ 1.01
FGFR1-223	ENST00000496296	TMEM216	Q9P0N5	145 aa		21.34	■■□□□ 1.01
FGFR1-223	ENST00000496296	UBA2	Q9UBT2	640 aa	Predicted RBP	21.34	■■□□□ 1.01
FGFR1-223	ENST00000496296	SORCS3	Q9UPU3	1222 aa		21.34	■■□□□ 1.01
FGFR1-223	ENST00000496296	E2F8	A0AVK6	867 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296		A8MUI8	341 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	ATP9B	O43861	1147 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	SIN3B	O75182	1162 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	ALOX15	P16050	662 aa	Predicted RBP	21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	HOXD9	P28356	352 aa	Predicted RBP	21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	RFTN1	Q14699	578 aa	Predicted RBP	21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	HSP90AA5P	Q58FG0	334 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	POTEH	Q6S545	545 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	LONP2	Q86WA8	852 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	BBS7	Q8IWZ6	715 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	OR52K2	Q8NGK3	314 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	SH3RF2	Q8TEC5	729 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	AGAP2	Q99490	1192 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	GPR22	Q99680	433 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	APOL2	Q9BQE5	337 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	BTBD10	Q9BSF8	475 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	YY1AP1	Q9H869	796 aa		21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296	C20orf96	Q9NUD7	363 aa	Predicted RBP	21.33	■■□□□ 1.01
FGFR1-223	ENST00000496296		A0A1W2PPC1	479 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	GFRA2	O00451	464 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	NRG2	O14511	850 aa	Predicted RBP	21.32	■■□□□ 1
FGFR1-223	ENST00000496296	PMPCB	O75439	489 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	EZR	P15311	586 aa	Known RBP	21.32	■■□□□ 1
FGFR1-223	ENST00000496296	NMBR	P28336	390 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	MAX	P61244	160 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	PPM1J	Q5JR12	505 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	MPP7	Q5T2T1	576 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	CXorf57	Q6NSI4	855 aa	Known RBP	21.32	■■□□□ 1
FGFR1-223	ENST00000496296	GRASP	Q7Z6J2	395 aa	Predicted RBP	21.32	■■□□□ 1
FGFR1-223	ENST00000496296	ADGRD2	Q7Z7M1	963 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	FAM13C	Q8NE31	585 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	CFAP61	Q8NHU2	1237 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	PIWIL2	Q8TC59	973 aa	Known RBP	21.32	■■□□□ 1
FGFR1-223	ENST00000496296	FICD	Q9BVA6	458 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	ACE2	Q9BYF1	805 aa	Predicted RBP	21.32	■■□□□ 1
FGFR1-223	ENST00000496296	NMUR2	Q9GZQ4	415 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	SMG9	Q9H0W8	520 aa	Known RBP	21.32	■■□□□ 1
FGFR1-223	ENST00000496296	ZNF395	Q9H8N7	513 aa	Predicted RBP	21.32	■■□□□ 1
FGFR1-223	ENST00000496296	EBF2	Q9HAK2	575 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	SLC28A3	Q9HAS3	691 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	SEPT3	Q9UH03	358 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	ANKRD6	Q9Y2G4	727 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	CBX4	O00257	560 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	MOSPD3	O75425	235 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	CYBB	P04839	570 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	SLC1A6	P48664	564 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	MFN1	Q8IWA4	741 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	ZNF778	Q96MU6	729 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	MIPEP	Q99797	713 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	RHOJ	Q9H4E5	214 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	TDP1	Q9NUW8	608 aa		21.32	■■□□□ 1
FGFR1-223	ENST00000496296	MIA3	Q5JRA6	1907 aa		21.31	■■□□□ 1
FGFR1-223	ENST00000496296	CD86	P42081	329 aa		21.31	■■□□□ 1
FGFR1-223	ENST00000496296	AQP5	P55064	265 aa		21.31	■■□□□ 1
FGFR1-223	ENST00000496296	SLC5A9	Q2M3M2	681 aa		21.31	■■□□□ 1
FGFR1-223	ENST00000496296	PRSS36	Q5K4E3	855 aa		21.31	■■□□□ 1
FGFR1-223	ENST00000496296	CMC1	Q7Z7K0	106 aa		21.31	■■□□□ 1
FGFR1-223	ENST00000496296	WDR75	Q8IWA0	830 aa	Known RBP	21.31	■■□□□ 1
FGFR1-223	ENST00000496296	PPP1R14C	Q8TAE6	165 aa		21.31	■■□□□ 1
FGFR1-223	ENST00000496296	PRR11	Q96HE9	360 aa	Predicted RBP	21.31	■■□□□ 1
FGFR1-223	ENST00000496296	VPS39	Q96JC1	886 aa		21.31	■■□□□ 1
FGFR1-223	ENST00000496296	CINP	Q9BW66	212 aa	Predicted RBP	21.31	■■□□□ 1
FGFR1-223	ENST00000496296	MMADHC	Q9H3L0	296 aa	Predicted RBP	21.31	■■□□□ 1
FGFR1-223	ENST00000496296	ARNT2	Q9HBZ2	717 aa		21.31	■■□□□ 1
FGFR1-223	ENST00000496296		A0A096LPK6	155 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	H2AFY	O75367	372 aa	Known RBP	21.3	■■□□□ 1
FGFR1-223	ENST00000496296	APOA4	P06727	396 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	SERPINA6	P08185	405 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	CPA3	P15088	417 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	TPH1	P17752	444 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	NRIP1	P48552	1158 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	DSC2	Q02487	901 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	DUSP6	Q16828	381 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	UGP2	Q16851	508 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	RANBP10	Q6VN20	620 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	ZCCHC23	Q6ZST2	131 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	ALYREF	Q86V81	257 aa	Known RBP	21.3	■■□□□ 1
FGFR1-223	ENST00000496296	ZC3HC1	Q86WB0	502 aa	Known RBP	21.3	■■□□□ 1
FGFR1-223	ENST00000496296	C10orf107	Q8IVU9	208 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	MRGPRX2	Q96LB1	330 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	SORT1	Q99523	831 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	CADM1	Q9BY67	442 aa	Known RBP	21.3	■■□□□ 1
FGFR1-223	ENST00000496296	IARS2	Q9NSE4	1012 aa	Known RBP	21.3	■■□□□ 1
FGFR1-223	ENST00000496296	MID2	Q9UJV3	735 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	NUMB	P49757	651 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	WNT3A	P56704	352 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	NTHL1	P78549	312 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	TUBB3	Q13509	450 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	PCSK7	Q16549	785 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	TTC7B	Q86TV6	843 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	PGBD5	Q8N414	524 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	RDH11	Q8TC12	318 aa		21.3	■■□□□ 1
FGFR1-223	ENST00000496296	SMG7	Q92540	1137 aa	Known RBP	21.3	■■□□□ 1
FGFR1-223	ENST00000496296	USP13	Q92995	863 aa	Predicted RBP	21.3	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms